Protein–RNA interactions for Protein: Q96NT5

SLC46A1, Proton-coupled folate transporter, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC46A1Q96NT5 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SLC46A1Q96NT5 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
SLC46A1Q96NT5 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SLC46A1Q96NT5 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SLC46A1Q96NT5 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SLC46A1Q96NT5 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SLC46A1Q96NT5 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
SLC46A1Q96NT5 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC16.68■□□□□ 0.26
SLC46A1Q96NT5 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SLC46A1Q96NT5 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC16.67■□□□□ 0.26
SLC46A1Q96NT5 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SLC46A1Q96NT5 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
SLC46A1Q96NT5 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC16.67■□□□□ 0.26
SLC46A1Q96NT5 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
SLC46A1Q96NT5 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC16.67■□□□□ 0.26
SLC46A1Q96NT5 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
SLC46A1Q96NT5 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SLC46A1Q96NT5 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SLC46A1Q96NT5 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
SLC46A1Q96NT5 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC16.67■□□□□ 0.26
SLC46A1Q96NT5 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC16.67■□□□□ 0.26
SLC46A1Q96NT5 SLC25A6P5-201ENST00000435663 894 ntBASIC16.67■□□□□ 0.26
SLC46A1Q96NT5 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC16.67■□□□□ 0.26
SLC46A1Q96NT5 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
SLC46A1Q96NT5 SIGLEC30P-201ENST00000455569 941 ntBASIC16.67■□□□□ 0.26
SLC46A1Q96NT5 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC16.67■□□□□ 0.26
SLC46A1Q96NT5 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC16.67■□□□□ 0.26
SLC46A1Q96NT5 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
SLC46A1Q96NT5 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SLC46A1Q96NT5 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
SLC46A1Q96NT5 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
SLC46A1Q96NT5 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SLC46A1Q96NT5 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
SLC46A1Q96NT5 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SLC46A1Q96NT5 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC16.67■□□□□ 0.26
SLC46A1Q96NT5 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
SLC46A1Q96NT5 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC16.67■□□□□ 0.26
SLC46A1Q96NT5 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SLC46A1Q96NT5 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SLC46A1Q96NT5 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SLC46A1Q96NT5 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC16.67■□□□□ 0.26
SLC46A1Q96NT5 HTR7P1-202ENST00000624664 4411 ntBASIC16.67■□□□□ 0.26
SLC46A1Q96NT5 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SLC46A1Q96NT5 AC148477.5-201ENST00000625164 1645 ntBASIC16.67■□□□□ 0.26
SLC46A1Q96NT5 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC16.66■□□□□ 0.26
SLC46A1Q96NT5 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SLC46A1Q96NT5 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SLC46A1Q96NT5 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
SLC46A1Q96NT5 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SLC46A1Q96NT5 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC16.66■□□□□ 0.26
SLC46A1Q96NT5 KRT18P55-202ENST00000578578 1546 ntBASIC16.66■□□□□ 0.26
SLC46A1Q96NT5 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SLC46A1Q96NT5 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC16.66■□□□□ 0.26
SLC46A1Q96NT5 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SLC46A1Q96NT5 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC16.66■□□□□ 0.26
SLC46A1Q96NT5 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
SLC46A1Q96NT5 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SLC46A1Q96NT5 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
SLC46A1Q96NT5 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SLC46A1Q96NT5 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SLC46A1Q96NT5 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SLC46A1Q96NT5 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC16.66■□□□□ 0.26
SLC46A1Q96NT5 FAM8A3P-201ENST00000427218 844 ntBASIC16.66■□□□□ 0.26
SLC46A1Q96NT5 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC16.66■□□□□ 0.26
SLC46A1Q96NT5 CCND1-203ENST00000536559 553 ntTSL 3 BASIC16.66■□□□□ 0.26
SLC46A1Q96NT5 CD63-210ENST00000550776 870 ntTSL 5 BASIC16.66■□□□□ 0.26
SLC46A1Q96NT5 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC16.66■□□□□ 0.26
SLC46A1Q96NT5 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SLC46A1Q96NT5 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SLC46A1Q96NT5 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
SLC46A1Q96NT5 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC16.66■□□□□ 0.26
SLC46A1Q96NT5 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC16.66■□□□□ 0.26
SLC46A1Q96NT5 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC16.66■□□□□ 0.26
SLC46A1Q96NT5 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC16.66■□□□□ 0.26
SLC46A1Q96NT5 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SLC46A1Q96NT5 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SLC46A1Q96NT5 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SLC46A1Q96NT5 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC16.66■□□□□ 0.26
SLC46A1Q96NT5 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
SLC46A1Q96NT5 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SLC46A1Q96NT5 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC16.65■□□□□ 0.26
SLC46A1Q96NT5 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SLC46A1Q96NT5 GID4-202ENST00000376345 1391 ntTSL 3 BASIC16.65■□□□□ 0.26
SLC46A1Q96NT5 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SLC46A1Q96NT5 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
SLC46A1Q96NT5 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SLC46A1Q96NT5 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SLC46A1Q96NT5 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SLC46A1Q96NT5 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SLC46A1Q96NT5 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC16.65■□□□□ 0.26
SLC46A1Q96NT5 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC16.65■□□□□ 0.26
SLC46A1Q96NT5 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SLC46A1Q96NT5 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC16.65■□□□□ 0.26
SLC46A1Q96NT5 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SLC46A1Q96NT5 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SLC46A1Q96NT5 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SLC46A1Q96NT5 MIR770-201ENST00000390219 98 ntBASIC16.65■□□□□ 0.26
SLC46A1Q96NT5 SYS1-203ENST00000414310 795 ntTSL 3 BASIC16.65■□□□□ 0.26
SLC46A1Q96NT5 ATP6V0CP3-201ENST00000417255 467 ntBASIC16.65■□□□□ 0.26
SLC46A1Q96NT5 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC16.65■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms