Protein–RNA interactions for Protein: Q96JM3

CHAMP1, Chromosome alignment-maintaining phosphoprotein 1, humanhuman

Predictions only

Length 812 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHAMP1Q96JM3 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CHAMP1Q96JM3 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CHAMP1Q96JM3 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
CHAMP1Q96JM3 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
CHAMP1Q96JM3 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC20.27■□□□□ 0.84
CHAMP1Q96JM3 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CHAMP1Q96JM3 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC20.27■□□□□ 0.84
CHAMP1Q96JM3 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CHAMP1Q96JM3 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC20.27■□□□□ 0.84
CHAMP1Q96JM3 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CHAMP1Q96JM3 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CHAMP1Q96JM3 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC20.27■□□□□ 0.84
CHAMP1Q96JM3 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC20.27■□□□□ 0.84
CHAMP1Q96JM3 TSPY12P-201ENST00000421279 868 ntBASIC20.27■□□□□ 0.84
CHAMP1Q96JM3 TPM4P1-201ENST00000436100 807 ntBASIC20.27■□□□□ 0.84
CHAMP1Q96JM3 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CHAMP1Q96JM3 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC20.27■□□□□ 0.84
CHAMP1Q96JM3 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
CHAMP1Q96JM3 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC20.27■□□□□ 0.84
CHAMP1Q96JM3 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
CHAMP1Q96JM3 AC008687.5-201ENST00000593746 558 ntBASIC20.27■□□□□ 0.84
CHAMP1Q96JM3 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
CHAMP1Q96JM3 AL139327.4-201ENST00000612362 153 ntBASIC20.27■□□□□ 0.84
CHAMP1Q96JM3 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC20.27■□□□□ 0.84
CHAMP1Q96JM3 AC009154.2-201ENST00000621177 724 ntBASIC20.27■□□□□ 0.84
CHAMP1Q96JM3 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CHAMP1Q96JM3 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
CHAMP1Q96JM3 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
CHAMP1Q96JM3 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC20.27■□□□□ 0.83
CHAMP1Q96JM3 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
CHAMP1Q96JM3 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.83
CHAMP1Q96JM3 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
CHAMP1Q96JM3 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
CHAMP1Q96JM3 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC20.27■□□□□ 0.83
CHAMP1Q96JM3 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC20.27■□□□□ 0.83
CHAMP1Q96JM3 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC20.27■□□□□ 0.83
CHAMP1Q96JM3 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
CHAMP1Q96JM3 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CHAMP1Q96JM3 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CHAMP1Q96JM3 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC20.26■□□□□ 0.83
CHAMP1Q96JM3 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
CHAMP1Q96JM3 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
CHAMP1Q96JM3 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC20.26■□□□□ 0.83
CHAMP1Q96JM3 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC20.26■□□□□ 0.83
CHAMP1Q96JM3 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC20.26■□□□□ 0.83
CHAMP1Q96JM3 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC20.26■□□□□ 0.83
CHAMP1Q96JM3 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CHAMP1Q96JM3 KRT89P-201ENST00000620027 1478 ntBASIC20.26■□□□□ 0.83
CHAMP1Q96JM3 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC20.26■□□□□ 0.83
CHAMP1Q96JM3 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CHAMP1Q96JM3 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC20.26■□□□□ 0.83
CHAMP1Q96JM3 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CHAMP1Q96JM3 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CHAMP1Q96JM3 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CHAMP1Q96JM3 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CHAMP1Q96JM3 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC20.26■□□□□ 0.83
CHAMP1Q96JM3 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
CHAMP1Q96JM3 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC20.26■□□□□ 0.83
CHAMP1Q96JM3 LINC02012-201ENST00000608206 1725 ntBASIC20.26■□□□□ 0.83
CHAMP1Q96JM3 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
CHAMP1Q96JM3 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CHAMP1Q96JM3 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CHAMP1Q96JM3 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
CHAMP1Q96JM3 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CHAMP1Q96JM3 BX276092.7-203ENST00000637198 1536 ntBASIC20.26■□□□□ 0.83
CHAMP1Q96JM3 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CHAMP1Q96JM3 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CHAMP1Q96JM3 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
CHAMP1Q96JM3 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CHAMP1Q96JM3 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CHAMP1Q96JM3 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC20.26■□□□□ 0.83
CHAMP1Q96JM3 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC20.26■□□□□ 0.83
CHAMP1Q96JM3 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
CHAMP1Q96JM3 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CHAMP1Q96JM3 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CHAMP1Q96JM3 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC20.25■□□□□ 0.83
CHAMP1Q96JM3 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CHAMP1Q96JM3 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC20.25■□□□□ 0.83
CHAMP1Q96JM3 AMT-250ENST00000637682 1823 ntTSL 5 BASIC20.25■□□□□ 0.83
CHAMP1Q96JM3 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CHAMP1Q96JM3 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC20.25■□□□□ 0.83
CHAMP1Q96JM3 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CHAMP1Q96JM3 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
CHAMP1Q96JM3 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CHAMP1Q96JM3 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CHAMP1Q96JM3 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC20.25■□□□□ 0.83
CHAMP1Q96JM3 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
CHAMP1Q96JM3 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
CHAMP1Q96JM3 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC20.25■□□□□ 0.83
CHAMP1Q96JM3 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
CHAMP1Q96JM3 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
CHAMP1Q96JM3 KRT18P38-201ENST00000449496 1282 ntBASIC20.25■□□□□ 0.83
CHAMP1Q96JM3 AC068472.1-201ENST00000474589 881 ntBASIC20.25■□□□□ 0.83
CHAMP1Q96JM3 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC20.25■□□□□ 0.83
CHAMP1Q96JM3 AC011558.1-201ENST00000623459 338 ntBASIC20.25■□□□□ 0.83
CHAMP1Q96JM3 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CHAMP1Q96JM3 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CHAMP1Q96JM3 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CHAMP1Q96JM3 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
CHAMP1Q96JM3 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms