Protein–RNA interactions for Protein: Q8NDH2

CCDC168, Coiled-coil domain-containing protein 168, humanhuman

Predictions only

Length 2,452 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC168Q8NDH2 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC14.49□□□□□ -0.09
CCDC168Q8NDH2 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC14.49□□□□□ -0.09
CCDC168Q8NDH2 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
CCDC168Q8NDH2 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CCDC168Q8NDH2 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CCDC168Q8NDH2 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC14.48□□□□□ -0.09
CCDC168Q8NDH2 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CCDC168Q8NDH2 GMCL1P1-201ENST00000463439 1581 ntBASIC14.48□□□□□ -0.09
CCDC168Q8NDH2 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
CCDC168Q8NDH2 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
CCDC168Q8NDH2 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC14.48□□□□□ -0.09
CCDC168Q8NDH2 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CCDC168Q8NDH2 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC14.48□□□□□ -0.09
CCDC168Q8NDH2 MIR658-201ENST00000385210 100 ntBASIC14.48□□□□□ -0.09
CCDC168Q8NDH2 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC14.48□□□□□ -0.09
CCDC168Q8NDH2 NME6-203ENST00000415644 849 ntTSL 2 BASIC14.48□□□□□ -0.09
CCDC168Q8NDH2 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CCDC168Q8NDH2 IGHV3-42-201ENST00000520410 361 ntBASIC14.48□□□□□ -0.09
CCDC168Q8NDH2 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC14.48□□□□□ -0.09
CCDC168Q8NDH2 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CCDC168Q8NDH2 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
CCDC168Q8NDH2 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
CCDC168Q8NDH2 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC14.48□□□□□ -0.09
CCDC168Q8NDH2 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CCDC168Q8NDH2 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC14.48□□□□□ -0.09
CCDC168Q8NDH2 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC14.48□□□□□ -0.09
CCDC168Q8NDH2 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CCDC168Q8NDH2 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC14.48□□□□□ -0.09
CCDC168Q8NDH2 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
CCDC168Q8NDH2 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CCDC168Q8NDH2 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CCDC168Q8NDH2 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CCDC168Q8NDH2 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CCDC168Q8NDH2 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC14.48□□□□□ -0.09
CCDC168Q8NDH2 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CCDC168Q8NDH2 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC14.48□□□□□ -0.09
CCDC168Q8NDH2 AC092552.1-201ENST00000547243 906 ntBASIC14.48□□□□□ -0.09
CCDC168Q8NDH2 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC14.48□□□□□ -0.09
CCDC168Q8NDH2 POLE2-203ENST00000553805 496 ntTSL 2 BASIC14.48□□□□□ -0.09
CCDC168Q8NDH2 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
CCDC168Q8NDH2 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC14.48□□□□□ -0.09
CCDC168Q8NDH2 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
CCDC168Q8NDH2 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CCDC168Q8NDH2 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CCDC168Q8NDH2 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
CCDC168Q8NDH2 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CCDC168Q8NDH2 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CCDC168Q8NDH2 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC14.47□□□□□ -0.09
CCDC168Q8NDH2 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CCDC168Q8NDH2 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CCDC168Q8NDH2 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC14.47□□□□□ -0.09
CCDC168Q8NDH2 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC14.47□□□□□ -0.09
CCDC168Q8NDH2 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CCDC168Q8NDH2 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC14.47□□□□□ -0.09
CCDC168Q8NDH2 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
CCDC168Q8NDH2 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC14.47□□□□□ -0.09
CCDC168Q8NDH2 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC14.47□□□□□ -0.09
CCDC168Q8NDH2 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CCDC168Q8NDH2 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC14.47□□□□□ -0.09
CCDC168Q8NDH2 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC14.47□□□□□ -0.09
CCDC168Q8NDH2 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
CCDC168Q8NDH2 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC14.47□□□□□ -0.09
CCDC168Q8NDH2 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC14.47□□□□□ -0.09
CCDC168Q8NDH2 KRT8P23-201ENST00000560090 1207 ntBASIC14.47□□□□□ -0.09
CCDC168Q8NDH2 RARRES2P8-201ENST00000566335 367 ntBASIC14.47□□□□□ -0.09
CCDC168Q8NDH2 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC14.47□□□□□ -0.09
CCDC168Q8NDH2 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
CCDC168Q8NDH2 AL138828.2-201ENST00000615812 383 ntBASIC14.47□□□□□ -0.09
CCDC168Q8NDH2 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CCDC168Q8NDH2 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
CCDC168Q8NDH2 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CCDC168Q8NDH2 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CCDC168Q8NDH2 AC129492.6-201ENST00000611383 1305 ntBASIC14.47□□□□□ -0.09
CCDC168Q8NDH2 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC14.47□□□□□ -0.09
CCDC168Q8NDH2 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC14.47□□□□□ -0.09
CCDC168Q8NDH2 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC14.47□□□□□ -0.09
CCDC168Q8NDH2 AC009336.1-201ENST00000608941 1553 ntBASIC14.47□□□□□ -0.09
CCDC168Q8NDH2 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
CCDC168Q8NDH2 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CCDC168Q8NDH2 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CCDC168Q8NDH2 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
CCDC168Q8NDH2 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CCDC168Q8NDH2 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC14.47□□□□□ -0.09
CCDC168Q8NDH2 AC109462.3-201ENST00000573934 613 ntBASIC14.47□□□□□ -0.09
CCDC168Q8NDH2 MIR6080-201ENST00000617359 66 ntBASIC14.47□□□□□ -0.09
CCDC168Q8NDH2 AL590560.3-201ENST00000623350 461 ntBASIC14.47□□□□□ -0.09
CCDC168Q8NDH2 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC14.47□□□□□ -0.09
CCDC168Q8NDH2 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC14.47□□□□□ -0.09
CCDC168Q8NDH2 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.09
CCDC168Q8NDH2 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC14.46□□□□□ -0.09
CCDC168Q8NDH2 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
CCDC168Q8NDH2 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC14.46□□□□□ -0.09
CCDC168Q8NDH2 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
CCDC168Q8NDH2 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CCDC168Q8NDH2 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
CCDC168Q8NDH2 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.09
CCDC168Q8NDH2 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC14.46□□□□□ -0.09
CCDC168Q8NDH2 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.09
CCDC168Q8NDH2 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
CCDC168Q8NDH2 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms