Protein–RNA interactions for Protein: P55291

CDH15, Cadherin-15, humanhuman

Predictions only

Length 814 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH15P55291 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
CDH15P55291 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
CDH15P55291 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CDH15P55291 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC16.34■□□□□ 0.21
CDH15P55291 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
CDH15P55291 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CDH15P55291 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
CDH15P55291 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CDH15P55291 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC16.34■□□□□ 0.21
CDH15P55291 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CDH15P55291 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC16.34■□□□□ 0.21
CDH15P55291 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC16.34■□□□□ 0.21
CDH15P55291 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
CDH15P55291 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CDH15P55291 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
CDH15P55291 RNF216P1-203ENST00000404404 2427 ntBASIC16.34■□□□□ 0.21
CDH15P55291 AC105917.1-201ENST00000506637 2539 ntBASIC16.34■□□□□ 0.21
CDH15P55291 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC16.34■□□□□ 0.21
CDH15P55291 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC16.34■□□□□ 0.21
CDH15P55291 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
CDH15P55291 RN7SL850P-201ENST00000579959 291 ntBASIC16.34■□□□□ 0.21
CDH15P55291 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC16.34■□□□□ 0.21
CDH15P55291 AC005363.2-201ENST00000618631 242 ntBASIC16.34■□□□□ 0.21
CDH15P55291 AL445675.2-201ENST00000620291 557 ntBASIC16.34■□□□□ 0.21
CDH15P55291 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC16.34■□□□□ 0.21
CDH15P55291 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC16.34■□□□□ 0.21
CDH15P55291 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC16.34■□□□□ 0.21
CDH15P55291 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CDH15P55291 AL136379.1-201ENST00000623471 2642 ntBASIC16.34■□□□□ 0.21
CDH15P55291 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC16.34■□□□□ 0.21
CDH15P55291 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC16.34■□□□□ 0.21
CDH15P55291 AC092068.3-201ENST00000587894 2016 ntBASIC16.34■□□□□ 0.21
CDH15P55291 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC16.34■□□□□ 0.21
CDH15P55291 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
CDH15P55291 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
CDH15P55291 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CDH15P55291 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CDH15P55291 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CDH15P55291 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC16.34■□□□□ 0.21
CDH15P55291 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CDH15P55291 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
CDH15P55291 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
CDH15P55291 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
CDH15P55291 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.21
CDH15P55291 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
CDH15P55291 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
CDH15P55291 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC16.33■□□□□ 0.21
CDH15P55291 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
CDH15P55291 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
CDH15P55291 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
CDH15P55291 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CDH15P55291 AC005052.1-201ENST00000625181 2492 ntBASIC16.33■□□□□ 0.2
CDH15P55291 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CDH15P55291 MIR564-202ENST00000385049 94 ntBASIC16.33■□□□□ 0.2
CDH15P55291 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
CDH15P55291 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC16.33■□□□□ 0.2
CDH15P55291 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC16.33■□□□□ 0.2
CDH15P55291 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CDH15P55291 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC16.33■□□□□ 0.2
CDH15P55291 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
CDH15P55291 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC16.33■□□□□ 0.2
CDH15P55291 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC16.33■□□□□ 0.2
CDH15P55291 KRT8P9-201ENST00000558927 1449 ntBASIC16.33■□□□□ 0.2
CDH15P55291 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CDH15P55291 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC16.33■□□□□ 0.2
CDH15P55291 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CDH15P55291 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CDH15P55291 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CDH15P55291 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CDH15P55291 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CDH15P55291 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CDH15P55291 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CDH15P55291 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC16.33■□□□□ 0.2
CDH15P55291 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CDH15P55291 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CDH15P55291 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC16.32■□□□□ 0.2
CDH15P55291 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CDH15P55291 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CDH15P55291 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC16.32■□□□□ 0.2
CDH15P55291 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CDH15P55291 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CDH15P55291 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CDH15P55291 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC16.32■□□□□ 0.2
CDH15P55291 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CDH15P55291 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CDH15P55291 PTPA-216ENST00000432651 857 ntTSL 2 BASIC16.32■□□□□ 0.2
CDH15P55291 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC16.32■□□□□ 0.2
CDH15P55291 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CDH15P55291 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC16.32■□□□□ 0.2
CDH15P55291 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC16.32■□□□□ 0.2
CDH15P55291 FITM1-202ENST00000559294 800 ntBASIC16.32■□□□□ 0.2
CDH15P55291 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC16.32■□□□□ 0.2
CDH15P55291 NAPSB-206ENST00000562112 1266 ntBASIC16.32■□□□□ 0.2
CDH15P55291 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC16.32■□□□□ 0.2
CDH15P55291 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CDH15P55291 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CDH15P55291 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC16.32■□□□□ 0.2
CDH15P55291 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
CDH15P55291 AC092865.7-201ENST00000641832 219 ntBASIC16.32■□□□□ 0.2
CDH15P55291 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms