Protein–RNA interactions for Protein: P54764

EPHA4, Ephrin type-A receptor 4, humanhuman

Predictions only

Length 986 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4P54764 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC16.8■□□□□ 0.28
EPHA4P54764 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC16.8■□□□□ 0.28
EPHA4P54764 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC16.8■□□□□ 0.28
EPHA4P54764 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
EPHA4P54764 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
EPHA4P54764 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
EPHA4P54764 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
EPHA4P54764 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
EPHA4P54764 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
EPHA4P54764 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
EPHA4P54764 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
EPHA4P54764 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
EPHA4P54764 NOC2LP2-201ENST00000407594 1944 ntBASIC16.8■□□□□ 0.28
EPHA4P54764 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
EPHA4P54764 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC16.79■□□□□ 0.28
EPHA4P54764 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
EPHA4P54764 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
EPHA4P54764 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
EPHA4P54764 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC16.79■□□□□ 0.28
EPHA4P54764 AC020763.4-201ENST00000623414 4170 ntBASIC16.79■□□□□ 0.28
EPHA4P54764 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
EPHA4P54764 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC16.79■□□□□ 0.28
EPHA4P54764 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
EPHA4P54764 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC16.79■□□□□ 0.28
EPHA4P54764 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
EPHA4P54764 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
EPHA4P54764 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
EPHA4P54764 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
EPHA4P54764 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
EPHA4P54764 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
EPHA4P54764 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC16.79■□□□□ 0.28
EPHA4P54764 PRSS29P-201ENST00000440800 595 ntBASIC16.79■□□□□ 0.28
EPHA4P54764 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
EPHA4P54764 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC16.79■□□□□ 0.28
EPHA4P54764 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC16.79■□□□□ 0.28
EPHA4P54764 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC16.79■□□□□ 0.28
EPHA4P54764 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC16.79■□□□□ 0.28
EPHA4P54764 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC16.79■□□□□ 0.28
EPHA4P54764 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC16.79■□□□□ 0.28
EPHA4P54764 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC16.79■□□□□ 0.28
EPHA4P54764 AC064836.3-201ENST00000607928 673 ntBASIC16.79■□□□□ 0.28
EPHA4P54764 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC16.79■□□□□ 0.28
EPHA4P54764 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
EPHA4P54764 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
EPHA4P54764 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
EPHA4P54764 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
EPHA4P54764 AMT-250ENST00000637682 1823 ntTSL 5 BASIC16.79■□□□□ 0.28
EPHA4P54764 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
EPHA4P54764 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
EPHA4P54764 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
EPHA4P54764 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
EPHA4P54764 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
EPHA4P54764 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
EPHA4P54764 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
EPHA4P54764 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
EPHA4P54764 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
EPHA4P54764 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
EPHA4P54764 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC16.78■□□□□ 0.28
EPHA4P54764 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC16.78■□□□□ 0.28
EPHA4P54764 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
EPHA4P54764 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
EPHA4P54764 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC16.78■□□□□ 0.28
EPHA4P54764 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
EPHA4P54764 AP002414.1-201ENST00000391405 1147 ntBASIC16.78■□□□□ 0.28
EPHA4P54764 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC16.78■□□□□ 0.28
EPHA4P54764 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
EPHA4P54764 AC007967.2-201ENST00000432613 625 ntBASIC16.78■□□□□ 0.28
EPHA4P54764 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
EPHA4P54764 AC108073.2-201ENST00000464002 357 ntBASIC16.78■□□□□ 0.28
EPHA4P54764 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC16.78■□□□□ 0.28
EPHA4P54764 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC16.78■□□□□ 0.28
EPHA4P54764 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
EPHA4P54764 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
EPHA4P54764 COMP-202ENST00000425807 2292 ntTSL 2 BASIC16.78■□□□□ 0.28
EPHA4P54764 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
EPHA4P54764 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.28
EPHA4P54764 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
EPHA4P54764 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC16.78■□□□□ 0.28
EPHA4P54764 REXO1L11P-201ENST00000620964 1927 ntBASIC16.78■□□□□ 0.28
EPHA4P54764 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC16.78■□□□□ 0.28
EPHA4P54764 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
EPHA4P54764 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
EPHA4P54764 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
EPHA4P54764 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC16.77■□□□□ 0.28
EPHA4P54764 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.28
EPHA4P54764 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
EPHA4P54764 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
EPHA4P54764 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
EPHA4P54764 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC16.77■□□□□ 0.28
EPHA4P54764 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
EPHA4P54764 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC16.77■□□□□ 0.28
EPHA4P54764 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
EPHA4P54764 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC16.77■□□□□ 0.28
EPHA4P54764 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC16.77■□□□□ 0.28
EPHA4P54764 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
EPHA4P54764 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
EPHA4P54764 MIR1233-2-201ENST00000408138 82 ntBASIC16.77■□□□□ 0.28
EPHA4P54764 MIR1233-1-201ENST00000408722 82 ntBASIC16.77■□□□□ 0.28
EPHA4P54764 CRYGEP-201ENST00000412192 528 ntBASIC16.77■□□□□ 0.28
EPHA4P54764 ATP6V0CP3-201ENST00000417255 467 ntBASIC16.77■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms