Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC21.53■■□□□ 1.04
NUP98P52948 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
NUP98P52948 MIR770-201ENST00000390219 98 ntBASIC21.53■■□□□ 1.04
NUP98P52948 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
NUP98P52948 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC21.53■■□□□ 1.04
NUP98P52948 FAM185BP-201ENST00000443595 716 ntBASIC21.53■■□□□ 1.04
NUP98P52948 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC21.53■■□□□ 1.04
NUP98P52948 AP001059.3-201ENST00000619053 235 ntBASIC21.53■■□□□ 1.04
NUP98P52948 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC21.53■■□□□ 1.04
NUP98P52948 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC21.53■■□□□ 1.04
NUP98P52948 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
NUP98P52948 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC21.53■■□□□ 1.04
NUP98P52948 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
NUP98P52948 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
NUP98P52948 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
NUP98P52948 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
NUP98P52948 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC21.53■■□□□ 1.04
NUP98P52948 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC21.53■■□□□ 1.04
NUP98P52948 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
NUP98P52948 TFAMP1-201ENST00000412727 736 ntBASIC21.52■■□□□ 1.04
NUP98P52948 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC21.52■■□□□ 1.04
NUP98P52948 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC21.52■■□□□ 1.04
NUP98P52948 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC21.52■■□□□ 1.04
NUP98P52948 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC21.52■■□□□ 1.04
NUP98P52948 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC21.52■■□□□ 1.04
NUP98P52948 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
NUP98P52948 AL096865.1-201ENST00000606796 927 ntBASIC21.52■■□□□ 1.04
NUP98P52948 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC21.52■■□□□ 1.04
NUP98P52948 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
NUP98P52948 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
NUP98P52948 AL121761.2-201ENST00000598007 1648 ntBASIC21.52■■□□□ 1.04
NUP98P52948 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
NUP98P52948 AC012317.2-201ENST00000623305 2251 ntBASIC21.52■■□□□ 1.04
NUP98P52948 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC21.52■■□□□ 1.04
NUP98P52948 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
NUP98P52948 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
NUP98P52948 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
NUP98P52948 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC21.52■■□□□ 1.04
NUP98P52948 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC21.52■■□□□ 1.04
NUP98P52948 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC21.52■■□□□ 1.04
NUP98P52948 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
NUP98P52948 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
NUP98P52948 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC21.51■■□□□ 1.03
NUP98P52948 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
NUP98P52948 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC21.51■■□□□ 1.03
NUP98P52948 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
NUP98P52948 SYS1-203ENST00000414310 795 ntTSL 3 BASIC21.51■■□□□ 1.03
NUP98P52948 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC21.51■■□□□ 1.03
NUP98P52948 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC21.51■■□□□ 1.03
NUP98P52948 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
NUP98P52948 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC21.51■■□□□ 1.03
NUP98P52948 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC21.51■■□□□ 1.03
NUP98P52948 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
NUP98P52948 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
NUP98P52948 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
NUP98P52948 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC21.51■■□□□ 1.03
NUP98P52948 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC21.51■■□□□ 1.03
NUP98P52948 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC21.51■■□□□ 1.03
NUP98P52948 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC21.51■■□□□ 1.03
NUP98P52948 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
NUP98P52948 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
NUP98P52948 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
NUP98P52948 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC21.5■■□□□ 1.03
NUP98P52948 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
NUP98P52948 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
NUP98P52948 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC21.5■■□□□ 1.03
NUP98P52948 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
NUP98P52948 DUX4L17-201ENST00000557360 1267 ntBASIC21.5■■□□□ 1.03
NUP98P52948 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC21.5■■□□□ 1.03
NUP98P52948 AL645728.2-201ENST00000641974 660 ntBASIC21.5■■□□□ 1.03
NUP98P52948 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
NUP98P52948 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
NUP98P52948 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC21.5■■□□□ 1.03
NUP98P52948 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
NUP98P52948 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC21.5■■□□□ 1.03
NUP98P52948 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
NUP98P52948 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC21.5■■□□□ 1.03
NUP98P52948 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC21.5■■□□□ 1.03
NUP98P52948 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
NUP98P52948 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC21.5■■□□□ 1.03
NUP98P52948 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
NUP98P52948 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC21.5■■□□□ 1.03
NUP98P52948 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC21.5■■□□□ 1.03
NUP98P52948 AC026120.1-201ENST00000611536 926 ntBASIC21.5■■□□□ 1.03
NUP98P52948 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC21.5■■□□□ 1.03
NUP98P52948 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC21.5■■□□□ 1.03
NUP98P52948 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
NUP98P52948 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
NUP98P52948 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
NUP98P52948 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
NUP98P52948 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
NUP98P52948 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
NUP98P52948 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
NUP98P52948 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
NUP98P52948 GPS2P2-201ENST00000430745 888 ntBASIC21.49■■□□□ 1.03
NUP98P52948 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC21.49■■□□□ 1.03
NUP98P52948 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC21.49■■□□□ 1.03
NUP98P52948 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
NUP98P52948 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC21.49■■□□□ 1.03
NUP98P52948 AC004835.2-201ENST00000603762 682 ntBASIC21.49■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms