Protein–RNA interactions for Protein: P31271

HOXA13, Homeobox protein Hox-A13, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA13P31271 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
HOXA13P31271 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC19.86■□□□□ 0.77
HOXA13P31271 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC19.86■□□□□ 0.77
HOXA13P31271 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
HOXA13P31271 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
HOXA13P31271 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
HOXA13P31271 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
HOXA13P31271 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
HOXA13P31271 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC19.86■□□□□ 0.77
HOXA13P31271 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC19.86■□□□□ 0.77
HOXA13P31271 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
HOXA13P31271 AC140113.2-201ENST00000604370 208 ntBASIC19.86■□□□□ 0.77
HOXA13P31271 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
HOXA13P31271 FST-202ENST00000396947 2538 ntTSL 5 BASIC19.86■□□□□ 0.77
HOXA13P31271 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
HOXA13P31271 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
HOXA13P31271 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
HOXA13P31271 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC19.86■□□□□ 0.77
HOXA13P31271 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
HOXA13P31271 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
HOXA13P31271 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
HOXA13P31271 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
HOXA13P31271 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
HOXA13P31271 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
HOXA13P31271 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC19.85■□□□□ 0.77
HOXA13P31271 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC19.85■□□□□ 0.77
HOXA13P31271 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC19.85■□□□□ 0.77
HOXA13P31271 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
HOXA13P31271 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
HOXA13P31271 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
HOXA13P31271 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC19.85■□□□□ 0.77
HOXA13P31271 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC19.85■□□□□ 0.77
HOXA13P31271 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
HOXA13P31271 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC19.85■□□□□ 0.77
HOXA13P31271 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC19.85■□□□□ 0.77
HOXA13P31271 AC007967.2-201ENST00000432613 625 ntBASIC19.85■□□□□ 0.77
HOXA13P31271 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
HOXA13P31271 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC19.85■□□□□ 0.77
HOXA13P31271 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC19.85■□□□□ 0.77
HOXA13P31271 TERC-201ENST00000602385 541 ntBASIC19.85■□□□□ 0.77
HOXA13P31271 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
HOXA13P31271 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
HOXA13P31271 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
HOXA13P31271 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
HOXA13P31271 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
HOXA13P31271 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC19.85■□□□□ 0.77
HOXA13P31271 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
HOXA13P31271 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC19.85■□□□□ 0.77
HOXA13P31271 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
HOXA13P31271 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC19.85■□□□□ 0.77
HOXA13P31271 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
HOXA13P31271 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC19.84■□□□□ 0.77
HOXA13P31271 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
HOXA13P31271 AC138932.1-201ENST00000534164 6830 ntBASIC19.84■□□□□ 0.77
HOXA13P31271 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
HOXA13P31271 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC19.84■□□□□ 0.77
HOXA13P31271 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
HOXA13P31271 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
HOXA13P31271 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
HOXA13P31271 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC19.84■□□□□ 0.77
HOXA13P31271 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
HOXA13P31271 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
HOXA13P31271 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
HOXA13P31271 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC19.84■□□□□ 0.77
HOXA13P31271 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
HOXA13P31271 AC108751.1-201ENST00000490852 363 ntBASIC19.84■□□□□ 0.77
HOXA13P31271 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
HOXA13P31271 AL353135.1-201ENST00000606729 504 ntBASIC19.84■□□□□ 0.77
HOXA13P31271 AC027601.4-201ENST00000611259 610 ntBASIC19.84■□□□□ 0.77
HOXA13P31271 AC023511.2-201ENST00000618803 211 ntBASIC19.84■□□□□ 0.77
HOXA13P31271 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
HOXA13P31271 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
HOXA13P31271 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC19.84■□□□□ 0.77
HOXA13P31271 AC067852.2-201ENST00000590513 2313 ntBASIC19.84■□□□□ 0.77
HOXA13P31271 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
HOXA13P31271 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC19.84■□□□□ 0.77
HOXA13P31271 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
HOXA13P31271 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC19.83■□□□□ 0.77
HOXA13P31271 MCC-208ENST00000514701 2855 ntTSL 2 BASIC19.83■□□□□ 0.77
HOXA13P31271 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC19.83■□□□□ 0.77
HOXA13P31271 ENSA-206ENST00000361631 725 ntTSL 2 BASIC19.83■□□□□ 0.77
HOXA13P31271 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
HOXA13P31271 FABP5-202ENST00000396359 986 ntTSL 5 BASIC19.83■□□□□ 0.77
HOXA13P31271 MED15P5-201ENST00000423150 992 ntBASIC19.83■□□□□ 0.77
HOXA13P31271 RPS15P9-201ENST00000494093 319 ntBASIC19.83■□□□□ 0.77
HOXA13P31271 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC19.83■□□□□ 0.77
HOXA13P31271 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC19.83■□□□□ 0.77
HOXA13P31271 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC19.83■□□□□ 0.77
HOXA13P31271 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC19.83■□□□□ 0.77
HOXA13P31271 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC19.83■□□□□ 0.77
HOXA13P31271 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
HOXA13P31271 PGM5P2-202ENST00000637225 1043 ntBASIC19.83■□□□□ 0.77
HOXA13P31271 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
HOXA13P31271 HCG11-201ENST00000411553 5696 ntBASIC19.83■□□□□ 0.76
HOXA13P31271 AC133963.1-201ENST00000504166 1679 ntBASIC19.83■□□□□ 0.76
HOXA13P31271 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC19.83■□□□□ 0.76
HOXA13P31271 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC19.83■□□□□ 0.76
HOXA13P31271 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
HOXA13P31271 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
HOXA13P31271 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms