Protein–RNA interactions for Protein: P07384

CAPN1, Calpain-1 catalytic subunit, humanhuman

Predictions only

Length 714 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1P07384 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CAPN1P07384 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC17.24■□□□□ 0.35
CAPN1P07384 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CAPN1P07384 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CAPN1P07384 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC17.23■□□□□ 0.35
CAPN1P07384 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
CAPN1P07384 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CAPN1P07384 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CAPN1P07384 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
CAPN1P07384 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
CAPN1P07384 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CAPN1P07384 NFIC-211ENST00000641145 8399 ntBASIC17.23■□□□□ 0.35
CAPN1P07384 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CAPN1P07384 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
CAPN1P07384 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC17.23■□□□□ 0.35
CAPN1P07384 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
CAPN1P07384 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CAPN1P07384 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CAPN1P07384 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CAPN1P07384 AL845331.1-201ENST00000424978 1190 ntBASIC17.23■□□□□ 0.35
CAPN1P07384 AC246785.2-201ENST00000432512 513 ntBASIC17.23■□□□□ 0.35
CAPN1P07384 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CAPN1P07384 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CAPN1P07384 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC17.23■□□□□ 0.35
CAPN1P07384 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CAPN1P07384 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC17.23■□□□□ 0.35
CAPN1P07384 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CAPN1P07384 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
CAPN1P07384 AC009154.2-201ENST00000621177 724 ntBASIC17.23■□□□□ 0.35
CAPN1P07384 LINC01451-201ENST00000623792 534 ntBASIC17.23■□□□□ 0.35
CAPN1P07384 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CAPN1P07384 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CAPN1P07384 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
CAPN1P07384 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CAPN1P07384 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC17.23■□□□□ 0.35
CAPN1P07384 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CAPN1P07384 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CAPN1P07384 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC17.23■□□□□ 0.35
CAPN1P07384 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
CAPN1P07384 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC17.23■□□□□ 0.35
CAPN1P07384 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CAPN1P07384 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CAPN1P07384 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC17.23■□□□□ 0.35
CAPN1P07384 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC17.23■□□□□ 0.35
CAPN1P07384 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
CAPN1P07384 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CAPN1P07384 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CAPN1P07384 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
CAPN1P07384 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC17.22■□□□□ 0.35
CAPN1P07384 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CAPN1P07384 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
CAPN1P07384 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CAPN1P07384 AC011270.2-201ENST00000624293 2550 ntBASIC17.22■□□□□ 0.35
CAPN1P07384 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
CAPN1P07384 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CAPN1P07384 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC17.22■□□□□ 0.35
CAPN1P07384 TSPY12P-201ENST00000421279 868 ntBASIC17.22■□□□□ 0.35
CAPN1P07384 IGHV3-47-201ENST00000425060 335 ntBASIC17.22■□□□□ 0.35
CAPN1P07384 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC17.22■□□□□ 0.35
CAPN1P07384 FOSL1P1-201ENST00000511041 816 ntBASIC17.22■□□□□ 0.35
CAPN1P07384 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CAPN1P07384 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC17.22■□□□□ 0.35
CAPN1P07384 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC17.22■□□□□ 0.35
CAPN1P07384 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC17.22■□□□□ 0.35
CAPN1P07384 IFNL4P1-201ENST00000607083 540 ntBASIC17.22■□□□□ 0.35
CAPN1P07384 AC124864.1-201ENST00000623408 392 ntBASIC17.22■□□□□ 0.35
CAPN1P07384 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC17.22■□□□□ 0.35
CAPN1P07384 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC17.22■□□□□ 0.35
CAPN1P07384 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CAPN1P07384 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CAPN1P07384 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CAPN1P07384 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CAPN1P07384 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CAPN1P07384 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CAPN1P07384 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
CAPN1P07384 PRORSD1P-202ENST00000563365 2154 ntBASIC17.22■□□□□ 0.35
CAPN1P07384 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CAPN1P07384 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CAPN1P07384 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CAPN1P07384 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
CAPN1P07384 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CAPN1P07384 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC17.21■□□□□ 0.35
CAPN1P07384 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC17.21■□□□□ 0.35
CAPN1P07384 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CAPN1P07384 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CAPN1P07384 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
CAPN1P07384 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC17.21■□□□□ 0.35
CAPN1P07384 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CAPN1P07384 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CAPN1P07384 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
CAPN1P07384 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CAPN1P07384 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CAPN1P07384 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC17.21■□□□□ 0.35
CAPN1P07384 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CAPN1P07384 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CAPN1P07384 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
CAPN1P07384 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC17.21■□□□□ 0.35
CAPN1P07384 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC17.21■□□□□ 0.35
CAPN1P07384 AC104819.1-201ENST00000504587 486 ntBASIC17.21■□□□□ 0.35
CAPN1P07384 GUSBP12-201ENST00000513727 720 ntBASIC17.21■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms