Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 DSE-201ENST00000331677 7237 ntAPPRIS P1 TSL 5 BASIC8.92□□□□□ -0.98
CDC42SE1Q9NRR8 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC8.92□□□□□ -0.98
CDC42SE1Q9NRR8 EDEM3-202ENST00000367512 6678 ntAPPRIS ALT2 TSL 1 (best) BASIC8.92□□□□□ -0.98
CDC42SE1Q9NRR8 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
CDC42SE1Q9NRR8 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC8.92□□□□□ -0.98
CDC42SE1Q9NRR8 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC8.92□□□□□ -0.98
CDC42SE1Q9NRR8 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
CDC42SE1Q9NRR8 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC8.92□□□□□ -0.98
CDC42SE1Q9NRR8 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
CDC42SE1Q9NRR8 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
CDC42SE1Q9NRR8 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
CDC42SE1Q9NRR8 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
CDC42SE1Q9NRR8 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC8.92□□□□□ -0.98
CDC42SE1Q9NRR8 ARAP3-201ENST00000239440 5250 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
CDC42SE1Q9NRR8 TNS2-202ENST00000314276 4944 ntAPPRIS P4 TSL 1 (best) BASIC8.92□□□□□ -0.98
CDC42SE1Q9NRR8 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC8.92□□□□□ -0.98
CDC42SE1Q9NRR8 PTPA-205ENST00000357197 2653 ntTSL 2 BASIC8.92□□□□□ -0.98
CDC42SE1Q9NRR8 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
CDC42SE1Q9NRR8 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC8.92□□□□□ -0.98
CDC42SE1Q9NRR8 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
CDC42SE1Q9NRR8 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC8.92□□□□□ -0.98
CDC42SE1Q9NRR8 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC8.92□□□□□ -0.98
CDC42SE1Q9NRR8 PPCDC-201ENST00000342932 2250 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
CDC42SE1Q9NRR8 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
CDC42SE1Q9NRR8 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC8.92□□□□□ -0.98
CDC42SE1Q9NRR8 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC8.92□□□□□ -0.98
CDC42SE1Q9NRR8 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC8.92□□□□□ -0.98
CDC42SE1Q9NRR8 PPP6R2-204ENST00000395744 3293 ntAPPRIS P3 TSL 1 (best) BASIC8.92□□□□□ -0.98
CDC42SE1Q9NRR8 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
CDC42SE1Q9NRR8 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
CDC42SE1Q9NRR8 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC8.92□□□□□ -0.98
CDC42SE1Q9NRR8 ITGB2-201ENST00000302347 2955 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
CDC42SE1Q9NRR8 LINC02048-201ENST00000440556 1771 ntTSL 5 BASIC8.91□□□□□ -0.98
CDC42SE1Q9NRR8 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
CDC42SE1Q9NRR8 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC8.91□□□□□ -0.98
CDC42SE1Q9NRR8 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC8.91□□□□□ -0.98
CDC42SE1Q9NRR8 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
CDC42SE1Q9NRR8 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC8.91□□□□□ -0.98
CDC42SE1Q9NRR8 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC8.91□□□□□ -0.98
CDC42SE1Q9NRR8 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC8.91□□□□□ -0.98
CDC42SE1Q9NRR8 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC8.91□□□□□ -0.98
CDC42SE1Q9NRR8 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
CDC42SE1Q9NRR8 HEPACAM-201ENST00000298251 3602 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
CDC42SE1Q9NRR8 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC8.91□□□□□ -0.98
CDC42SE1Q9NRR8 MANBA-202ENST00000505239 2577 ntTSL 2 BASIC8.91□□□□□ -0.98
CDC42SE1Q9NRR8 UBE3A-226ENST00000637886 8725 ntAPPRIS ALT1 TSL 5 BASIC8.91□□□□□ -0.98
CDC42SE1Q9NRR8 AC093668.2-201ENST00000481893 3569 ntTSL 2 BASIC8.91□□□□□ -0.98
CDC42SE1Q9NRR8 AC105052.1-201ENST00000519541 3569 ntAPPRIS P1 TSL 2 BASIC8.91□□□□□ -0.98
CDC42SE1Q9NRR8 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
CDC42SE1Q9NRR8 AP006587.3-201ENST00000525742 1516 ntBASIC8.91□□□□□ -0.98
CDC42SE1Q9NRR8 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
CDC42SE1Q9NRR8 AC027601.5-201ENST00000624065 2482 ntBASIC8.91□□□□□ -0.98
CDC42SE1Q9NRR8 CICP17-201ENST00000418553 2377 ntBASIC8.91□□□□□ -0.98
CDC42SE1Q9NRR8 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC8.91□□□□□ -0.98
CDC42SE1Q9NRR8 KIAA1217-203ENST00000376452 6052 ntAPPRIS ALT2 TSL 1 (best) BASIC8.91□□□□□ -0.98
CDC42SE1Q9NRR8 MICB-202ENST00000399150 2346 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
CDC42SE1Q9NRR8 FAM212B-201ENST00000357260 5980 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
CDC42SE1Q9NRR8 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
CDC42SE1Q9NRR8 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
CDC42SE1Q9NRR8 AL499627.1-201ENST00000569373 2188 ntBASIC8.91□□□□□ -0.98
CDC42SE1Q9NRR8 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
CDC42SE1Q9NRR8 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
CDC42SE1Q9NRR8 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC8.91□□□□□ -0.98
CDC42SE1Q9NRR8 AC025884.2-201ENST00000553429 711 ntBASIC8.91□□□□□ -0.98
CDC42SE1Q9NRR8 CIB2-204ENST00000557846 934 ntTSL 3 BASIC8.91□□□□□ -0.98
CDC42SE1Q9NRR8 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
CDC42SE1Q9NRR8 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC8.91□□□□□ -0.98
CDC42SE1Q9NRR8 CHML-205ENST00000638160 705 ntTSL 3 BASIC8.91□□□□□ -0.98
CDC42SE1Q9NRR8 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
CDC42SE1Q9NRR8 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
CDC42SE1Q9NRR8 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC8.91□□□□□ -0.98
CDC42SE1Q9NRR8 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
CDC42SE1Q9NRR8 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
CDC42SE1Q9NRR8 SLC6A6P1-201ENST00000413933 1850 ntBASIC8.91□□□□□ -0.98
CDC42SE1Q9NRR8 GALC-206ENST00000544807 2528 ntTSL 2 BASIC8.91□□□□□ -0.98
CDC42SE1Q9NRR8 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
CDC42SE1Q9NRR8 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
CDC42SE1Q9NRR8 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC8.91□□□□□ -0.98
CDC42SE1Q9NRR8 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
CDC42SE1Q9NRR8 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
CDC42SE1Q9NRR8 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
CDC42SE1Q9NRR8 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC8.91□□□□□ -0.98
CDC42SE1Q9NRR8 CLCN7-203ENST00000448525 4151 ntTSL 2 BASIC8.91□□□□□ -0.98
CDC42SE1Q9NRR8 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
CDC42SE1Q9NRR8 STK3-201ENST00000419617 2826 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
CDC42SE1Q9NRR8 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
CDC42SE1Q9NRR8 AL355312.1-201ENST00000407115 2176 ntBASIC8.9□□□□□ -0.98
CDC42SE1Q9NRR8 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC8.9□□□□□ -0.98
CDC42SE1Q9NRR8 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
CDC42SE1Q9NRR8 OPRL1-201ENST00000336866 3321 ntAPPRIS P1 TSL 5 BASIC8.9□□□□□ -0.98
CDC42SE1Q9NRR8 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
CDC42SE1Q9NRR8 AC117489.1-201ENST00000625169 3217 ntBASIC8.9□□□□□ -0.98
CDC42SE1Q9NRR8 PCK2-216ENST00000561286 2012 ntTSL 2 BASIC8.9□□□□□ -0.98
CDC42SE1Q9NRR8 FUT3-201ENST00000303225 2584 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
CDC42SE1Q9NRR8 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
CDC42SE1Q9NRR8 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
CDC42SE1Q9NRR8 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC8.9□□□□□ -0.98
CDC42SE1Q9NRR8 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
CDC42SE1Q9NRR8 VAMP4-201ENST00000236192 5159 ntAPPRIS P3 TSL 1 (best) BASIC8.9□□□□□ -0.98
CDC42SE1Q9NRR8 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC8.9□□□□□ -0.98
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms