Protein–RNA interactions for Protein: Q9C0G0

ZNF407, Zinc finger protein 407, humanhuman

Predictions only

Length 2,248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF407Q9C0G0 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
ZNF407Q9C0G0 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC15.69■□□□□ 0.1
ZNF407Q9C0G0 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
ZNF407Q9C0G0 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
ZNF407Q9C0G0 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
ZNF407Q9C0G0 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
ZNF407Q9C0G0 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
ZNF407Q9C0G0 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
ZNF407Q9C0G0 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
ZNF407Q9C0G0 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
ZNF407Q9C0G0 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
ZNF407Q9C0G0 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
ZNF407Q9C0G0 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
ZNF407Q9C0G0 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
ZNF407Q9C0G0 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
ZNF407Q9C0G0 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
ZNF407Q9C0G0 IMP4-203ENST00000409935 958 ntTSL 5 BASIC15.68■□□□□ 0.1
ZNF407Q9C0G0 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC15.68■□□□□ 0.1
ZNF407Q9C0G0 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC15.68■□□□□ 0.1
ZNF407Q9C0G0 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC15.68■□□□□ 0.1
ZNF407Q9C0G0 S100A2-206ENST00000497140 697 ntTSL 2 BASIC15.68■□□□□ 0.1
ZNF407Q9C0G0 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC15.68■□□□□ 0.1
ZNF407Q9C0G0 IGHV3-52-201ENST00000519770 353 ntBASIC15.68■□□□□ 0.1
ZNF407Q9C0G0 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC15.68■□□□□ 0.1
ZNF407Q9C0G0 AL139424.1-201ENST00000607572 797 ntBASIC15.68■□□□□ 0.1
ZNF407Q9C0G0 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC15.68■□□□□ 0.1
ZNF407Q9C0G0 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC15.68■□□□□ 0.1
ZNF407Q9C0G0 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC15.68■□□□□ 0.1
ZNF407Q9C0G0 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC15.68■□□□□ 0.1
ZNF407Q9C0G0 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
ZNF407Q9C0G0 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC15.68■□□□□ 0.1
ZNF407Q9C0G0 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
ZNF407Q9C0G0 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC15.68■□□□□ 0.1
ZNF407Q9C0G0 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
ZNF407Q9C0G0 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
ZNF407Q9C0G0 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC15.68■□□□□ 0.1
ZNF407Q9C0G0 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
ZNF407Q9C0G0 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC15.68■□□□□ 0.1
ZNF407Q9C0G0 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC15.68■□□□□ 0.1
ZNF407Q9C0G0 AC003669.1-201ENST00000334569 611 ntBASIC15.68■□□□□ 0.1
ZNF407Q9C0G0 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC15.68■□□□□ 0.1
ZNF407Q9C0G0 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC15.68■□□□□ 0.1
ZNF407Q9C0G0 NABP1-203ENST00000409510 843 ntTSL 5 BASIC15.68■□□□□ 0.1
ZNF407Q9C0G0 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC15.68■□□□□ 0.1
ZNF407Q9C0G0 RNA5SP416-201ENST00000516838 111 ntBASIC15.68■□□□□ 0.1
ZNF407Q9C0G0 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC15.68■□□□□ 0.1
ZNF407Q9C0G0 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
ZNF407Q9C0G0 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC15.68■□□□□ 0.1
ZNF407Q9C0G0 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
ZNF407Q9C0G0 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
ZNF407Q9C0G0 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
ZNF407Q9C0G0 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
ZNF407Q9C0G0 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
ZNF407Q9C0G0 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
ZNF407Q9C0G0 KRT18P55-202ENST00000578578 1546 ntBASIC15.68■□□□□ 0.1
ZNF407Q9C0G0 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
ZNF407Q9C0G0 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
ZNF407Q9C0G0 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
ZNF407Q9C0G0 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC15.67■□□□□ 0.1
ZNF407Q9C0G0 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
ZNF407Q9C0G0 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
ZNF407Q9C0G0 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
ZNF407Q9C0G0 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
ZNF407Q9C0G0 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC15.67■□□□□ 0.1
ZNF407Q9C0G0 AC211486.1-202ENST00000416371 468 ntBASIC15.67■□□□□ 0.1
ZNF407Q9C0G0 RPS8P6-201ENST00000426177 609 ntBASIC15.67■□□□□ 0.1
ZNF407Q9C0G0 AC211476.1-201ENST00000503899 468 ntBASIC15.67■□□□□ 0.1
ZNF407Q9C0G0 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC15.67■□□□□ 0.1
ZNF407Q9C0G0 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC15.67■□□□□ 0.1
ZNF407Q9C0G0 AL805961.1-202ENST00000641562 540 ntBASIC15.67■□□□□ 0.1
ZNF407Q9C0G0 AC092865.6-201ENST00000642101 219 ntBASIC15.67■□□□□ 0.1
ZNF407Q9C0G0 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC15.67■□□□□ 0.1
ZNF407Q9C0G0 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC15.67■□□□□ 0.1
ZNF407Q9C0G0 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
ZNF407Q9C0G0 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC15.67■□□□□ 0.1
ZNF407Q9C0G0 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
ZNF407Q9C0G0 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
ZNF407Q9C0G0 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
ZNF407Q9C0G0 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
ZNF407Q9C0G0 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
ZNF407Q9C0G0 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
ZNF407Q9C0G0 GPR89P-201ENST00000407924 1495 ntBASIC15.67■□□□□ 0.1
ZNF407Q9C0G0 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC15.67■□□□□ 0.1
ZNF407Q9C0G0 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
ZNF407Q9C0G0 MCCD1P2-201ENST00000423228 335 ntBASIC15.67■□□□□ 0.1
ZNF407Q9C0G0 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
ZNF407Q9C0G0 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
ZNF407Q9C0G0 AC040169.1-201ENST00000565382 521 ntBASIC15.67■□□□□ 0.1
ZNF407Q9C0G0 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC15.67■□□□□ 0.1
ZNF407Q9C0G0 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
ZNF407Q9C0G0 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
ZNF407Q9C0G0 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC15.67■□□□□ 0.1
ZNF407Q9C0G0 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC15.67■□□□□ 0.1
ZNF407Q9C0G0 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
ZNF407Q9C0G0 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
ZNF407Q9C0G0 AL355312.1-201ENST00000407115 2176 ntBASIC15.66■□□□□ 0.1
ZNF407Q9C0G0 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
ZNF407Q9C0G0 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
ZNF407Q9C0G0 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
ZNF407Q9C0G0 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms