Protein–RNA interactions for Protein: Q96BP2

CHCHD1, Coiled-coil-helix-coiled-coil-helix domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD1Q96BP2 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
CHCHD1Q96BP2 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CHCHD1Q96BP2 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CHCHD1Q96BP2 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
CHCHD1Q96BP2 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
CHCHD1Q96BP2 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CHCHD1Q96BP2 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CHCHD1Q96BP2 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
CHCHD1Q96BP2 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
CHCHD1Q96BP2 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC12.75□□□□□ -0.37
CHCHD1Q96BP2 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
CHCHD1Q96BP2 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CHCHD1Q96BP2 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC12.75□□□□□ -0.37
CHCHD1Q96BP2 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC12.75□□□□□ -0.37
CHCHD1Q96BP2 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
CHCHD1Q96BP2 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
CHCHD1Q96BP2 APTR-203ENST00000430801 583 ntTSL 5 BASIC12.75□□□□□ -0.37
CHCHD1Q96BP2 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CHCHD1Q96BP2 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC12.75□□□□□ -0.37
CHCHD1Q96BP2 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC12.75□□□□□ -0.37
CHCHD1Q96BP2 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC12.75□□□□□ -0.37
CHCHD1Q96BP2 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC12.75□□□□□ -0.37
CHCHD1Q96BP2 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC12.75□□□□□ -0.37
CHCHD1Q96BP2 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC12.75□□□□□ -0.37
CHCHD1Q96BP2 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC12.75□□□□□ -0.37
CHCHD1Q96BP2 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
CHCHD1Q96BP2 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
CHCHD1Q96BP2 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
CHCHD1Q96BP2 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CHCHD1Q96BP2 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
CHCHD1Q96BP2 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CHCHD1Q96BP2 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CHCHD1Q96BP2 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CHCHD1Q96BP2 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
CHCHD1Q96BP2 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC12.74□□□□□ -0.37
CHCHD1Q96BP2 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
CHCHD1Q96BP2 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
CHCHD1Q96BP2 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CHCHD1Q96BP2 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
CHCHD1Q96BP2 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CHCHD1Q96BP2 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC12.74□□□□□ -0.37
CHCHD1Q96BP2 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
CHCHD1Q96BP2 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CHCHD1Q96BP2 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC12.74□□□□□ -0.37
CHCHD1Q96BP2 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC12.74□□□□□ -0.37
CHCHD1Q96BP2 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CHCHD1Q96BP2 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CHCHD1Q96BP2 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC12.74□□□□□ -0.37
CHCHD1Q96BP2 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CHCHD1Q96BP2 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CHCHD1Q96BP2 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
CHCHD1Q96BP2 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
CHCHD1Q96BP2 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC12.74□□□□□ -0.37
CHCHD1Q96BP2 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CHCHD1Q96BP2 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CHCHD1Q96BP2 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
CHCHD1Q96BP2 SERPINH1P1-201ENST00000419794 1249 ntBASIC12.74□□□□□ -0.37
CHCHD1Q96BP2 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC12.74□□□□□ -0.37
CHCHD1Q96BP2 DDX43P3-201ENST00000441064 443 ntBASIC12.74□□□□□ -0.37
CHCHD1Q96BP2 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
CHCHD1Q96BP2 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
CHCHD1Q96BP2 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
CHCHD1Q96BP2 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
CHCHD1Q96BP2 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC12.74□□□□□ -0.37
CHCHD1Q96BP2 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CHCHD1Q96BP2 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC12.74□□□□□ -0.37
CHCHD1Q96BP2 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CHCHD1Q96BP2 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CHCHD1Q96BP2 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
CHCHD1Q96BP2 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CHCHD1Q96BP2 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
CHCHD1Q96BP2 FES-204ENST00000414248 2327 ntTSL 2 BASIC12.74□□□□□ -0.37
CHCHD1Q96BP2 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC12.74□□□□□ -0.37
CHCHD1Q96BP2 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
CHCHD1Q96BP2 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CHCHD1Q96BP2 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CHCHD1Q96BP2 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CHCHD1Q96BP2 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CHCHD1Q96BP2 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CHCHD1Q96BP2 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC12.73□□□□□ -0.37
CHCHD1Q96BP2 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC12.73□□□□□ -0.37
CHCHD1Q96BP2 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
CHCHD1Q96BP2 AC006058.4-201ENST00000624016 1670 ntBASIC12.73□□□□□ -0.37
CHCHD1Q96BP2 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
CHCHD1Q96BP2 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CHCHD1Q96BP2 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CHCHD1Q96BP2 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
CHCHD1Q96BP2 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
CHCHD1Q96BP2 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
CHCHD1Q96BP2 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC12.73□□□□□ -0.37
CHCHD1Q96BP2 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
CHCHD1Q96BP2 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CHCHD1Q96BP2 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC12.73□□□□□ -0.37
CHCHD1Q96BP2 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CHCHD1Q96BP2 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
CHCHD1Q96BP2 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
CHCHD1Q96BP2 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC12.73□□□□□ -0.37
CHCHD1Q96BP2 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
CHCHD1Q96BP2 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CHCHD1Q96BP2 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms