Protein–RNA interactions for Protein: Q8NE35

CPEB3, Cytoplasmic polyadenylation element-binding protein 3, humanhuman

Known RBP Predictions only

Length 698 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB3Q8NE35 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
CPEB3Q8NE35 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CPEB3Q8NE35 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
CPEB3Q8NE35 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
CPEB3Q8NE35 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CPEB3Q8NE35 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CPEB3Q8NE35 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
CPEB3Q8NE35 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CPEB3Q8NE35 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CPEB3Q8NE35 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC15.32■□□□□ 0.04
CPEB3Q8NE35 AL049757.1-201ENST00000616842 1596 ntBASIC15.32■□□□□ 0.04
CPEB3Q8NE35 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC15.32■□□□□ 0.04
CPEB3Q8NE35 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC15.32■□□□□ 0.04
CPEB3Q8NE35 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
CPEB3Q8NE35 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CPEB3Q8NE35 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
CPEB3Q8NE35 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC15.32■□□□□ 0.04
CPEB3Q8NE35 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CPEB3Q8NE35 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
CPEB3Q8NE35 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CPEB3Q8NE35 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
CPEB3Q8NE35 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CPEB3Q8NE35 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CPEB3Q8NE35 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CPEB3Q8NE35 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
CPEB3Q8NE35 CD9-202ENST00000382515 1229 ntTSL 5 BASIC15.32■□□□□ 0.04
CPEB3Q8NE35 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
CPEB3Q8NE35 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC15.32■□□□□ 0.04
CPEB3Q8NE35 NUS1P2-201ENST00000417358 873 ntBASIC15.32■□□□□ 0.04
CPEB3Q8NE35 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
CPEB3Q8NE35 AC103564.2-201ENST00000432853 1299 ntBASIC15.32■□□□□ 0.04
CPEB3Q8NE35 NUS1P1-201ENST00000446295 882 ntBASIC15.32■□□□□ 0.04
CPEB3Q8NE35 KRT18P56-201ENST00000507275 550 ntBASIC15.32■□□□□ 0.04
CPEB3Q8NE35 FICD-205ENST00000552758 603 ntTSL 2 BASIC15.32■□□□□ 0.04
CPEB3Q8NE35 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC15.32■□□□□ 0.04
CPEB3Q8NE35 AC109462.3-201ENST00000573934 613 ntBASIC15.32■□□□□ 0.04
CPEB3Q8NE35 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC15.32■□□□□ 0.04
CPEB3Q8NE35 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC15.32■□□□□ 0.04
CPEB3Q8NE35 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC15.32■□□□□ 0.04
CPEB3Q8NE35 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC15.32■□□□□ 0.04
CPEB3Q8NE35 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CPEB3Q8NE35 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CPEB3Q8NE35 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CPEB3Q8NE35 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC15.32■□□□□ 0.04
CPEB3Q8NE35 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CPEB3Q8NE35 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CPEB3Q8NE35 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CPEB3Q8NE35 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
CPEB3Q8NE35 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CPEB3Q8NE35 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CPEB3Q8NE35 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CPEB3Q8NE35 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CPEB3Q8NE35 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CPEB3Q8NE35 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
CPEB3Q8NE35 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
CPEB3Q8NE35 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CPEB3Q8NE35 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
CPEB3Q8NE35 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CPEB3Q8NE35 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CPEB3Q8NE35 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC15.31■□□□□ 0.04
CPEB3Q8NE35 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CPEB3Q8NE35 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CPEB3Q8NE35 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
CPEB3Q8NE35 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CPEB3Q8NE35 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CPEB3Q8NE35 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC15.31■□□□□ 0.04
CPEB3Q8NE35 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
CPEB3Q8NE35 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC15.31■□□□□ 0.04
CPEB3Q8NE35 AC002558.1-201ENST00000488906 803 ntBASIC15.31■□□□□ 0.04
CPEB3Q8NE35 SKP2-204ENST00000508514 821 ntTSL 3 BASIC15.31■□□□□ 0.04
CPEB3Q8NE35 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC15.31■□□□□ 0.04
CPEB3Q8NE35 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC15.31■□□□□ 0.04
CPEB3Q8NE35 MIR5100-201ENST00000579544 119 ntBASIC15.31■□□□□ 0.04
CPEB3Q8NE35 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC15.31■□□□□ 0.04
CPEB3Q8NE35 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC15.31■□□□□ 0.04
CPEB3Q8NE35 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CPEB3Q8NE35 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC15.31■□□□□ 0.04
CPEB3Q8NE35 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC15.31■□□□□ 0.04
CPEB3Q8NE35 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC15.31■□□□□ 0.04
CPEB3Q8NE35 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC15.31■□□□□ 0.04
CPEB3Q8NE35 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CPEB3Q8NE35 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC15.31■□□□□ 0.04
CPEB3Q8NE35 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CPEB3Q8NE35 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
CPEB3Q8NE35 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC15.31■□□□□ 0.04
CPEB3Q8NE35 KRT8P10-201ENST00000450021 1447 ntBASIC15.31■□□□□ 0.04
CPEB3Q8NE35 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC15.31■□□□□ 0.04
CPEB3Q8NE35 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC15.31■□□□□ 0.04
CPEB3Q8NE35 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CPEB3Q8NE35 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CPEB3Q8NE35 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CPEB3Q8NE35 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC15.31■□□□□ 0.04
CPEB3Q8NE35 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CPEB3Q8NE35 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC15.31■□□□□ 0.04
CPEB3Q8NE35 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CPEB3Q8NE35 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CPEB3Q8NE35 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
CPEB3Q8NE35 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC15.3■□□□□ 0.04
CPEB3Q8NE35 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
CPEB3Q8NE35 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms