Protein–RNA interactions for Protein: Q8N9S9

SNX31, Sorting nexin-31, humanhuman

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX31Q8N9S9 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC17.3■□□□□ 0.36
SNX31Q8N9S9 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
SNX31Q8N9S9 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
SNX31Q8N9S9 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC17.3■□□□□ 0.36
SNX31Q8N9S9 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
SNX31Q8N9S9 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SNX31Q8N9S9 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC17.3■□□□□ 0.36
SNX31Q8N9S9 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SNX31Q8N9S9 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC17.3■□□□□ 0.36
SNX31Q8N9S9 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC17.3■□□□□ 0.36
SNX31Q8N9S9 SPDYE13P-201ENST00000445314 798 ntBASIC17.3■□□□□ 0.36
SNX31Q8N9S9 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SNX31Q8N9S9 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
SNX31Q8N9S9 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC17.3■□□□□ 0.36
SNX31Q8N9S9 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC17.3■□□□□ 0.36
SNX31Q8N9S9 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC17.3■□□□□ 0.36
SNX31Q8N9S9 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
SNX31Q8N9S9 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
SNX31Q8N9S9 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC17.3■□□□□ 0.36
SNX31Q8N9S9 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SNX31Q8N9S9 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC17.3■□□□□ 0.36
SNX31Q8N9S9 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SNX31Q8N9S9 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC17.3■□□□□ 0.36
SNX31Q8N9S9 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SNX31Q8N9S9 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
SNX31Q8N9S9 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC17.3■□□□□ 0.36
SNX31Q8N9S9 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SNX31Q8N9S9 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SNX31Q8N9S9 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
SNX31Q8N9S9 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SNX31Q8N9S9 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC17.29■□□□□ 0.36
SNX31Q8N9S9 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
SNX31Q8N9S9 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
SNX31Q8N9S9 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SNX31Q8N9S9 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC17.29■□□□□ 0.36
SNX31Q8N9S9 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
SNX31Q8N9S9 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
SNX31Q8N9S9 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SNX31Q8N9S9 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
SNX31Q8N9S9 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
SNX31Q8N9S9 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC17.29■□□□□ 0.36
SNX31Q8N9S9 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
SNX31Q8N9S9 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SNX31Q8N9S9 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC17.29■□□□□ 0.36
SNX31Q8N9S9 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SNX31Q8N9S9 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC17.29■□□□□ 0.36
SNX31Q8N9S9 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SNX31Q8N9S9 AL645929.1-201ENST00000420084 975 ntBASIC17.29■□□□□ 0.36
SNX31Q8N9S9 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC17.29■□□□□ 0.36
SNX31Q8N9S9 SAPCD2P2-201ENST00000431719 1174 ntBASIC17.29■□□□□ 0.36
SNX31Q8N9S9 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SNX31Q8N9S9 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
SNX31Q8N9S9 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SNX31Q8N9S9 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC17.29■□□□□ 0.36
SNX31Q8N9S9 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC17.29■□□□□ 0.36
SNX31Q8N9S9 WDR6-223ENST00000627177 207 ntTSL 2 BASIC17.29■□□□□ 0.36
SNX31Q8N9S9 ANKRD20A8P-203ENST00000641373 517 ntBASIC17.29■□□□□ 0.36
SNX31Q8N9S9 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
SNX31Q8N9S9 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC17.29■□□□□ 0.36
SNX31Q8N9S9 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC17.29■□□□□ 0.36
SNX31Q8N9S9 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
SNX31Q8N9S9 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SNX31Q8N9S9 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SNX31Q8N9S9 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
SNX31Q8N9S9 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC17.29■□□□□ 0.36
SNX31Q8N9S9 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
SNX31Q8N9S9 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SNX31Q8N9S9 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
SNX31Q8N9S9 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SNX31Q8N9S9 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
SNX31Q8N9S9 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC17.28■□□□□ 0.36
SNX31Q8N9S9 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SNX31Q8N9S9 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SNX31Q8N9S9 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SNX31Q8N9S9 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SNX31Q8N9S9 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
SNX31Q8N9S9 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
SNX31Q8N9S9 MTCL1P1-201ENST00000446207 792 ntBASIC17.28■□□□□ 0.36
SNX31Q8N9S9 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SNX31Q8N9S9 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC17.28■□□□□ 0.36
SNX31Q8N9S9 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SNX31Q8N9S9 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC17.28■□□□□ 0.36
SNX31Q8N9S9 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC17.28■□□□□ 0.36
SNX31Q8N9S9 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC17.28■□□□□ 0.36
SNX31Q8N9S9 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SNX31Q8N9S9 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SNX31Q8N9S9 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC17.28■□□□□ 0.36
SNX31Q8N9S9 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SNX31Q8N9S9 AC008894.3-201ENST00000624324 3103 ntBASIC17.28■□□□□ 0.36
SNX31Q8N9S9 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
SNX31Q8N9S9 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SNX31Q8N9S9 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SNX31Q8N9S9 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SNX31Q8N9S9 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
SNX31Q8N9S9 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC17.28■□□□□ 0.36
SNX31Q8N9S9 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
SNX31Q8N9S9 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
SNX31Q8N9S9 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC17.27■□□□□ 0.36
SNX31Q8N9S9 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC17.27■□□□□ 0.36
SNX31Q8N9S9 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms