Protein–RNA interactions for Protein: P58876

HIST1H2BD, Histone H2B type 1-D, humanhuman

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H2BDP58876 PGR-210ENST00000619228 3038 ntTSL 5 BASIC13.18□□□□□ -0.3
HIST1H2BDP58876 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
HIST1H2BDP58876 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
HIST1H2BDP58876 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC13.17□□□□□ -0.3
HIST1H2BDP58876 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
HIST1H2BDP58876 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
HIST1H2BDP58876 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
HIST1H2BDP58876 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC13.17□□□□□ -0.3
HIST1H2BDP58876 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
HIST1H2BDP58876 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
HIST1H2BDP58876 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
HIST1H2BDP58876 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
HIST1H2BDP58876 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
HIST1H2BDP58876 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
HIST1H2BDP58876 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC13.17□□□□□ -0.3
HIST1H2BDP58876 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
HIST1H2BDP58876 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
HIST1H2BDP58876 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC13.17□□□□□ -0.3
HIST1H2BDP58876 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
HIST1H2BDP58876 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
HIST1H2BDP58876 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
HIST1H2BDP58876 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
HIST1H2BDP58876 AC068587.6-202ENST00000641839 5619 ntBASIC13.17□□□□□ -0.3
HIST1H2BDP58876 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
HIST1H2BDP58876 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
HIST1H2BDP58876 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
HIST1H2BDP58876 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
HIST1H2BDP58876 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC13.17□□□□□ -0.3
HIST1H2BDP58876 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
HIST1H2BDP58876 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC13.17□□□□□ -0.3
HIST1H2BDP58876 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC13.17□□□□□ -0.3
HIST1H2BDP58876 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC13.17□□□□□ -0.3
HIST1H2BDP58876 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC13.17□□□□□ -0.3
HIST1H2BDP58876 MPST-208ENST00000628507 698 ntTSL 5 BASIC13.17□□□□□ -0.3
HIST1H2BDP58876 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
HIST1H2BDP58876 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
HIST1H2BDP58876 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
HIST1H2BDP58876 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
HIST1H2BDP58876 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
HIST1H2BDP58876 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
HIST1H2BDP58876 MOK-233ENST00000524214 1539 ntTSL 2 BASIC13.17□□□□□ -0.3
HIST1H2BDP58876 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC13.17□□□□□ -0.3
HIST1H2BDP58876 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
HIST1H2BDP58876 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
HIST1H2BDP58876 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
HIST1H2BDP58876 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
HIST1H2BDP58876 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC13.17□□□□□ -0.3
HIST1H2BDP58876 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
HIST1H2BDP58876 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
HIST1H2BDP58876 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
HIST1H2BDP58876 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
HIST1H2BDP58876 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC13.17□□□□□ -0.3
HIST1H2BDP58876 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
HIST1H2BDP58876 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
HIST1H2BDP58876 AC079781.5-202ENST00000641784 3743 ntBASIC13.16□□□□□ -0.3
HIST1H2BDP58876 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC13.16□□□□□ -0.3
HIST1H2BDP58876 AC015656.1-201ENST00000624209 3578 ntBASIC13.16□□□□□ -0.3
HIST1H2BDP58876 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
HIST1H2BDP58876 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
HIST1H2BDP58876 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
HIST1H2BDP58876 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
HIST1H2BDP58876 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
HIST1H2BDP58876 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
HIST1H2BDP58876 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC13.16□□□□□ -0.3
HIST1H2BDP58876 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC13.16□□□□□ -0.3
HIST1H2BDP58876 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
HIST1H2BDP58876 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
HIST1H2BDP58876 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC13.16□□□□□ -0.3
HIST1H2BDP58876 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC13.16□□□□□ -0.3
HIST1H2BDP58876 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC13.16□□□□□ -0.3
HIST1H2BDP58876 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
HIST1H2BDP58876 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC13.16□□□□□ -0.3
HIST1H2BDP58876 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC13.16□□□□□ -0.3
HIST1H2BDP58876 NT5C3AP1-201ENST00000394500 1012 ntBASIC13.16□□□□□ -0.3
HIST1H2BDP58876 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC13.16□□□□□ -0.3
HIST1H2BDP58876 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC13.16□□□□□ -0.3
HIST1H2BDP58876 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC13.16□□□□□ -0.3
HIST1H2BDP58876 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
HIST1H2BDP58876 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
HIST1H2BDP58876 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
HIST1H2BDP58876 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
HIST1H2BDP58876 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
HIST1H2BDP58876 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC13.16□□□□□ -0.3
HIST1H2BDP58876 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC13.16□□□□□ -0.3
HIST1H2BDP58876 PPT1-215ENST00000641471 2368 ntBASIC13.16□□□□□ -0.3
HIST1H2BDP58876 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
HIST1H2BDP58876 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC13.16□□□□□ -0.3
HIST1H2BDP58876 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
HIST1H2BDP58876 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC13.16□□□□□ -0.3
HIST1H2BDP58876 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
HIST1H2BDP58876 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
HIST1H2BDP58876 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
HIST1H2BDP58876 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
HIST1H2BDP58876 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC13.16□□□□□ -0.3
HIST1H2BDP58876 GSN-203ENST00000373808 2664 ntTSL 2 BASIC13.16□□□□□ -0.3
HIST1H2BDP58876 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC13.16□□□□□ -0.3
HIST1H2BDP58876 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
HIST1H2BDP58876 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC13.15□□□□□ -0.3
HIST1H2BDP58876 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC13.15□□□□□ -0.3
HIST1H2BDP58876 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC13.15□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms