Protein–RNA interactions for Protein: P55084

HADHB, Trifunctional enzyme subunit beta, mitochondrial, humanhuman

Known RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHBP55084 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HADHBP55084 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
HADHBP55084 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HADHBP55084 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HADHBP55084 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
HADHBP55084 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
HADHBP55084 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
HADHBP55084 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HADHBP55084 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HADHBP55084 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
HADHBP55084 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
HADHBP55084 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HADHBP55084 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC18.29■□□□□ 0.52
HADHBP55084 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC18.29■□□□□ 0.52
HADHBP55084 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
HADHBP55084 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
HADHBP55084 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
HADHBP55084 FUT8-AS1-201ENST00000621019 1521 ntBASIC18.29■□□□□ 0.52
HADHBP55084 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
HADHBP55084 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC18.29■□□□□ 0.52
HADHBP55084 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
HADHBP55084 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
HADHBP55084 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
HADHBP55084 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
HADHBP55084 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC18.29■□□□□ 0.52
HADHBP55084 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
HADHBP55084 CD9-202ENST00000382515 1229 ntTSL 5 BASIC18.29■□□□□ 0.52
HADHBP55084 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC18.29■□□□□ 0.52
HADHBP55084 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC18.29■□□□□ 0.52
HADHBP55084 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC18.29■□□□□ 0.52
HADHBP55084 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC18.29■□□□□ 0.52
HADHBP55084 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC18.29■□□□□ 0.52
HADHBP55084 LINC01238-205ENST00000567549 1107 ntBASIC18.29■□□□□ 0.52
HADHBP55084 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC18.29■□□□□ 0.52
HADHBP55084 AC011840.4-201ENST00000578471 627 ntBASIC18.29■□□□□ 0.52
HADHBP55084 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC18.29■□□□□ 0.52
HADHBP55084 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC18.29■□□□□ 0.52
HADHBP55084 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
HADHBP55084 AC009336.1-201ENST00000608941 1553 ntBASIC18.29■□□□□ 0.52
HADHBP55084 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
HADHBP55084 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
HADHBP55084 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
HADHBP55084 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC18.29■□□□□ 0.52
HADHBP55084 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
HADHBP55084 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
HADHBP55084 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
HADHBP55084 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC18.28■□□□□ 0.52
HADHBP55084 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC18.28■□□□□ 0.52
HADHBP55084 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
HADHBP55084 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
HADHBP55084 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
HADHBP55084 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC18.28■□□□□ 0.52
HADHBP55084 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
HADHBP55084 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
HADHBP55084 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC18.28■□□□□ 0.52
HADHBP55084 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC18.28■□□□□ 0.52
HADHBP55084 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
HADHBP55084 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC18.28■□□□□ 0.52
HADHBP55084 DUX4L26-201ENST00000489078 1255 ntBASIC18.28■□□□□ 0.52
HADHBP55084 AC009533.2-201ENST00000543664 586 ntBASIC18.28■□□□□ 0.52
HADHBP55084 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC18.28■□□□□ 0.52
HADHBP55084 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC18.28■□□□□ 0.52
HADHBP55084 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC18.28■□□□□ 0.52
HADHBP55084 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
HADHBP55084 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
HADHBP55084 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
HADHBP55084 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
HADHBP55084 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC18.28■□□□□ 0.52
HADHBP55084 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
HADHBP55084 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
HADHBP55084 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
HADHBP55084 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
HADHBP55084 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
HADHBP55084 AL135999.2-201ENST00000622438 1686 ntBASIC18.28■□□□□ 0.52
HADHBP55084 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
HADHBP55084 AC078925.2-201ENST00000624013 1973 ntBASIC18.28■□□□□ 0.52
HADHBP55084 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
HADHBP55084 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC18.28■□□□□ 0.52
HADHBP55084 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
HADHBP55084 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
HADHBP55084 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
HADHBP55084 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC18.27■□□□□ 0.52
HADHBP55084 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
HADHBP55084 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
HADHBP55084 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
HADHBP55084 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
HADHBP55084 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
HADHBP55084 STX3-203ENST00000529177 1571 ntTSL 2 BASIC18.27■□□□□ 0.52
HADHBP55084 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
HADHBP55084 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC18.27■□□□□ 0.52
HADHBP55084 CTNS-203ENST00000399306 803 ntTSL 3 BASIC18.27■□□□□ 0.52
HADHBP55084 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
HADHBP55084 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC18.27■□□□□ 0.52
HADHBP55084 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC18.27■□□□□ 0.52
HADHBP55084 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC18.27■□□□□ 0.52
HADHBP55084 AC011467.2-201ENST00000598425 242 ntBASIC18.27■□□□□ 0.52
HADHBP55084 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
HADHBP55084 IGHV3-41-201ENST00000613121 348 ntBASIC18.27■□□□□ 0.52
HADHBP55084 AD001527.2-201ENST00000622994 785 ntBASIC18.27■□□□□ 0.52
HADHBP55084 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC18.27■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms