Protein–RNA interactions for Protein: P52298

NCBP2, Nuclear cap-binding protein subunit 2, humanhuman

Known RBP eCLIP

Length 156 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP2P52298 PPP1R35-205ENST00000491407 942 ntTSL 524.74■■□□□ 1.559e-7■□□□□ 10.3
NCBP2P52298 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.459e-7■□□□□ 10.3
NCBP2P52298 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC13.83□□□□□ -0.27e-20■□□□□ 10.3
NCBP2P52298 P4HA1-201ENST00000263556 2844 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.537e-20■□□□□ 10.3
NCBP2P52298 P4HA1-204ENST00000394890 2844 ntAPPRIS ALT1 TSL 1 (best) BASIC11.76□□□□□ -0.537e-20■□□□□ 10.3
NCBP2P52298 P4HA1-202ENST00000307116 2727 ntAPPRIS ALT1 TSL 1 (best) BASIC10.07□□□□□ -0.87e-20■□□□□ 10.3
NCBP2P52298 P4HA1-203ENST00000373008 2727 ntAPPRIS ALT1 TSL 1 (best) BASIC10.07□□□□□ -0.87e-20■□□□□ 10.3
NCBP2P52298 TRRAP-203ENST00000417523 550 ntTSL 414.66□□□□□ -0.067e-8■□□□□ 10.3
NCBP2P52298 TRRAP-201ENST00000355540 12590 ntAPPRIS P3 TSL 1 (best) BASIC6.97□□□□□ -1.297e-8■□□□□ 10.3
NCBP2P52298 TRRAP-202ENST00000359863 12677 ntAPPRIS ALT2 TSL 1 (best) BASIC6.95□□□□□ -1.37e-8■□□□□ 10.3
NCBP2P52298 TRRAP-207ENST00000628380 12644 ntAPPRIS ALT2 TSL 5 BASIC6.89□□□□□ -1.317e-8■□□□□ 10.3
NCBP2P52298 ADSL-211ENST00000623632 847 ntTSL 518.54■□□□□ 0.569e-11■□□□□ 10.3
NCBP2P52298 ADSL-215ENST00000624503 754 ntTSL 518.54■□□□□ 0.569e-11■□□□□ 10.3
NCBP2P52298 ADSL-204ENST00000466863 686 ntTSL 217.23■□□□□ 0.359e-11■□□□□ 10.3
NCBP2P52298 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC16.66■□□□□ 0.269e-11■□□□□ 10.3
NCBP2P52298 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC15.17■□□□□ 0.029e-11■□□□□ 10.3
NCBP2P52298 ADSL-222ENST00000637669 1927 ntTSL 514.54□□□□□ -0.089e-11■□□□□ 10.3
NCBP2P52298 ADSL-214ENST00000624474 678 ntTSL 513.01□□□□□ -0.339e-11■□□□□ 10.3
NCBP2P52298 ADSL-218ENST00000636265 1239 ntTSL 512.65□□□□□ -0.389e-11■□□□□ 10.3
NCBP2P52298 ADSL-201ENST00000216194 1620 ntTSL 2 BASIC12.5□□□□□ -0.419e-11■□□□□ 10.3
NCBP2P52298 AL022238.4-201ENST00000639722 4563 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.439e-11■□□□□ 10.3
NCBP2P52298 ADSL-209ENST00000623287 856 ntTSL 511.26□□□□□ -0.619e-11■□□□□ 10.3
NCBP2P52298 ADSL-208ENST00000623063 4359 ntAPPRIS P2 TSL 1 (best) BASIC10.03□□□□□ -0.89e-11■□□□□ 10.3
NCBP2P52298 ADSL-205ENST00000477111 826 ntTSL 38.93□□□□□ -0.989e-11■□□□□ 10.3
NCBP2P52298 ADSL-221ENST00000637666 1135 ntTSL 57.59□□□□□ -1.199e-11■□□□□ 10.3
NCBP2P52298 ADSL-212ENST00000623978 712 ntTSL 55.84□□□□□ -1.479e-11■□□□□ 10.3
NCBP2P52298 NARF-222ENST00000583908 430 ntTSL 39.19□□□□□ -0.949e-7■□□□□ 10.3
NCBP2P52298 NARF-211ENST00000578820 625 ntTSL 39.16□□□□□ -0.949e-7■□□□□ 10.3
NCBP2P52298 KLF6-202ENST00000380946 744 ntTSL 219.42■□□□□ 0.76e-7■□□□□ 10.3
NCBP2P52298 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC17.39■□□□□ 0.376e-7■□□□□ 10.3
NCBP2P52298 KLF6-206ENST00000497571 4656 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.466e-7■□□□□ 10.3
NCBP2P52298 KLF6-207ENST00000542957 4537 ntTSL 5 BASIC11.39□□□□□ -0.596e-7■□□□□ 10.3
NCBP2P52298 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.212e-8■□□□□ 10.2
NCBP2P52298 ZFP36L1-202ENST00000439696 3190 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.742e-8■□□□□ 10.2
NCBP2P52298 SLC7A6-215ENST00000568088 510 ntTSL 324.71■■□□□ 1.551e-7■□□□□ 10.2
NCBP2P52298 SLC7A6-208ENST00000564708 547 ntTSL 318.95■□□□□ 0.621e-7■□□□□ 10.2
NCBP2P52298 SLC7A6-202ENST00000379152 5074 ntTSL 1 (best)8.86□□□□□ -0.991e-7■□□□□ 10.2
NCBP2P52298 SLC7A6-201ENST00000219343 6251 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.011e-7■□□□□ 10.2
NCBP2P52298 SLC7A6-211ENST00000566834 573 ntTSL 57.31□□□□□ -1.241e-7■□□□□ 10.2
NCBP2P52298 SLC7A6-209ENST00000566454 6308 ntAPPRIS P1 TSL 5 BASIC7.21□□□□□ -1.261e-7■□□□□ 10.2
NCBP2P52298 SLC7A6-216ENST00000618043 6124 ntTSL 5 BASIC7.2□□□□□ -1.261e-7■□□□□ 10.2
NCBP2P52298 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.347e-8■□□□□ 10.2
NCBP2P52298 TDP2-205ENST00000480495 714 ntTSL 1 (best)13.74□□□□□ -0.217e-8■□□□□ 10.2
NCBP2P52298 TDP2-204ENST00000478507 573 ntTSL 511.41□□□□□ -0.587e-8■□□□□ 10.2
NCBP2P52298 FAM133B-208ENST00000481407 2293 ntTSL 212.63□□□□□ -0.396e-7■□□□□ 10.2
NCBP2P52298 FAM133B-204ENST00000445716 2026 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.496e-7■□□□□ 10.2
NCBP2P52298 FAM133B-203ENST00000438306 2434 ntTSL 1 (best) BASIC11.21□□□□□ -0.616e-7■□□□□ 10.2
NCBP2P52298 FAM133B-207ENST00000480397 410 ntTSL 29.57□□□□□ -0.886e-7■□□□□ 10.2
NCBP2P52298 FAM133B-201ENST00000415397 1890 ntTSL 57.19□□□□□ -1.266e-7■□□□□ 10.2
NCBP2P52298 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.232e-7■□□□□ 10.2
NCBP2P52298 FOXA3-202ENST00000594297 538 ntTSL 314.2□□□□□ -0.142e-7■□□□□ 10.2
NCBP2P52298 ATAD2-201ENST00000287394 5565 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.56e-7■□□□□ 10.2
NCBP2P52298 ATAD2-202ENST00000517666 4995 ntTSL 511.84□□□□□ -0.516e-7■□□□□ 10.2
NCBP2P52298 ATAD2-204ENST00000521496 3133 ntTSL 1 (best)9.9□□□□□ -0.826e-7■□□□□ 10.2
NCBP2P52298 ATAD2-205ENST00000521903 5143 ntTSL 1 (best) BASIC8.47□□□□□ -1.056e-7■□□□□ 10.2
NCBP2P52298 ATAD2-203ENST00000519124 4650 ntTSL 1 (best)6.17□□□□□ -1.426e-7■□□□□ 10.2
NCBP2P52298 ARSB-204ENST00000521117 573 ntTSL 322.53■■□□□ 1.27e-13■□□□□ 10.2
NCBP2P52298 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC22.05■■□□□ 1.127e-13■□□□□ 10.2
NCBP2P52298 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC21.46■■□□□ 1.037e-13■□□□□ 10.2
NCBP2P52298 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.837e-13■□□□□ 10.2
NCBP2P52298 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC19.51■□□□□ 0.717e-13■□□□□ 10.2
NCBP2P52298 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.717e-13■□□□□ 10.2
NCBP2P52298 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.477e-13■□□□□ 10.2
NCBP2P52298 GMPPA-207ENST00000443704 1783 ntTSL 516.64■□□□□ 0.257e-13■□□□□ 10.2
NCBP2P52298 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.157e-13■□□□□ 10.2
NCBP2P52298 GMPPA-208ENST00000455657 907 ntTSL 515.86■□□□□ 0.137e-13■□□□□ 10.2
NCBP2P52298 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.047e-13■□□□□ 10.2
NCBP2P52298 GMPPA-210ENST00000480506 835 ntTSL 511.49□□□□□ -0.577e-13■□□□□ 10.2
NCBP2P52298 GMPPA-206ENST00000435316 786 ntTSL 510.7□□□□□ -0.77e-13■□□□□ 10.2
NCBP2P52298 GMPPA-214ENST00000635609 569 ntTSL 510.01□□□□□ -0.817e-13■□□□□ 10.2
NCBP2P52298 ELOVL6-204ENST00000506461 575 ntTSL 47.36□□□□□ -1.231e-12■□□□□ 10.2
NCBP2P52298 VMP1-206ENST00000587945 583 ntTSL 313.02□□□□□ -0.339e-8■□□□□ 10.2
NCBP2P52298 VMP1-203ENST00000586245 544 ntTSL 412.74□□□□□ -0.379e-8■□□□□ 10.2
NCBP2P52298 VMP1-210ENST00000589823 580 ntTSL 312.74□□□□□ -0.379e-8■□□□□ 10.2
NCBP2P52298 VMP1-217ENST00000593168 558 ntTSL 312.65□□□□□ -0.389e-8■□□□□ 10.2
NCBP2P52298 VMP1-202ENST00000585847 545 ntTSL 211.83□□□□□ -0.529e-8■□□□□ 10.2
NCBP2P52298 VMP1-211ENST00000591315 800 ntTSL 310.63□□□□□ -0.719e-8■□□□□ 10.2
NCBP2P52298 VMP1-207ENST00000588131 587 ntTSL 210.63□□□□□ -0.719e-8■□□□□ 10.2
NCBP2P52298 VMP1-214ENST00000592106 341 ntTSL 59.2□□□□□ -0.949e-8■□□□□ 10.2
NCBP2P52298 VMP1-201ENST00000262291 2712 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.354e-8■□□□□ 10.2
NCBP2P52298 VMP1-213ENST00000591877 791 ntTSL 36.75□□□□□ -1.339e-9■□□□□ 10.2
NCBP2P52298 VMP1-208ENST00000588617 884 ntTSL 45.55□□□□□ -1.529e-9■□□□□ 10.2
NCBP2P52298 VMP1-215ENST00000592619 838 ntTSL 54.28□□□□□ -1.729e-9■□□□□ 10.2
NCBP2P52298 VMP1-212ENST00000591782 729 ntTSL 52.44□□□□□ -2.029e-9■□□□□ 10.2
NCBP2P52298 SH3PXD2A-203ENST00000369774 11468 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.351e-6■□□□□ 10.2
NCBP2P52298 SLC6A8-203ENST00000429147 334 ntTSL 215.36■□□□□ 0.051e-12■□□□□ 10.2
NCBP2P52298 MTERF4-213ENST00000464344 3993 ntTSL 312.02□□□□□ -0.486e-7■□□□□ 10.2
NCBP2P52298 MTERF4-211ENST00000455202 2626 ntTSL 211.16□□□□□ -0.626e-7■□□□□ 10.2
NCBP2P52298 MTERF4-214ENST00000475860 789 ntTSL 1 (best)11.03□□□□□ -0.646e-7■□□□□ 10.2
NCBP2P52298 MTERF4-202ENST00000391980 1637 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.766e-7■□□□□ 10.2
NCBP2P52298 MTERF4-215ENST00000476564 614 ntTSL 29.63□□□□□ -0.876e-7■□□□□ 10.2
NCBP2P52298 MTERF4-219ENST00000493169 576 ntTSL 49.63□□□□□ -0.876e-7■□□□□ 10.2
NCBP2P52298 MTERF4-209ENST00000439144 583 ntTSL 39.25□□□□□ -0.936e-7■□□□□ 10.2
NCBP2P52298 MTERF4-201ENST00000241527 4529 ntTSL 1 (best)9.23□□□□□ -0.936e-7■□□□□ 10.2
NCBP2P52298 MTERF4-217ENST00000480298 585 ntTSL 48.37□□□□□ -1.076e-7■□□□□ 10.2
NCBP2P52298 MTERF4-222ENST00000614476 4524 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.126e-7■□□□□ 10.2
NCBP2P52298 MTERF4-203ENST00000401626 561 ntTSL 56.95□□□□□ -1.36e-7■□□□□ 10.2
NCBP2P52298 MTERF4-205ENST00000407095 799 ntTSL 2 BASIC6.61□□□□□ -1.356e-7■□□□□ 10.2
NCBP2P52298 MTERF4-212ENST00000460915 571 ntTSL 46.35□□□□□ -1.396e-7■□□□□ 10.2
NCBP2P52298 MTERF4-220ENST00000495694 909 ntTSL 5 BASIC6.27□□□□□ -1.416e-7■□□□□ 10.2
Retrieved 100 of 18,329 protein–RNA pairs in 337.9 ms