RNA–Protein interactions for RNA: ENST00000591782.1

VMP1-212, Transcript of vacuole membrane protein 1, humanhuman

TSL 5

Gene VMP1, Length 729 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-212ENST00000591782 AEBP2Q6ZN18 517 aaPredicted RBP18.08■□□□□ 0.48
VMP1-212ENST00000591782 CHIC1Q5VXU3 224 aa17.73■□□□□ 0.43
VMP1-212ENST00000591782 PHF23Q9BUL5 403 aaPredicted RBP15.63■□□□□ 0.09
VMP1-212ENST00000591782 SENP3Q9H4L4 574 aaPredicted RBP15.3■□□□□ 0.04
VMP1-212ENST00000591782 PLPPR3Q6T4P5 718 aa14.43□□□□□ -0.1
VMP1-212ENST00000591782 FOXD1Q16676 465 aa14.22□□□□□ -0.13
VMP1-212ENST00000591782 ADRA2BP18089 450 aa13.76□□□□□ -0.21
VMP1-212ENST00000591782 PPP6R1Q9UPN7 881 aa13.76□□□□□ -0.21
VMP1-212ENST00000591782 PIAS4Q8N2W9 510 aaPredicted RBP13.43□□□□□ -0.26
VMP1-212ENST00000591782 MSH5O43196 834 aa13.04□□□□□ -0.32
VMP1-212ENST00000591782 PPP4R3CPQ6ZMV5 832 aa12.74□□□□□ -0.37
VMP1-212ENST00000591782 KCNA4P22459 653 aa12.57□□□□□ -0.4
VMP1-212ENST00000591782 SCAF1Q9H7N4 1312 aaKnown RBP12.53□□□□□ -0.4
VMP1-212ENST00000591782 MAPK8IP2Q13387 824 aaPredicted RBP12.45□□□□□ -0.42
VMP1-212ENST00000591782 NCBP3Q53F19 620 aaKnown RBP12.4□□□□□ -0.42
VMP1-212ENST00000591782 CNKSR2Q8WXI2 1034 aa12.35□□□□□ -0.43
VMP1-212ENST00000591782 NPM3O75607 178 aaKnown RBP12.26□□□□□ -0.45
VMP1-212ENST00000591782 DMRT2Q9Y5R5 561 aa12.24□□□□□ -0.45
VMP1-212ENST00000591782 RNF216Q9NWF9 866 aaPredicted RBP12.09□□□□□ -0.47
VMP1-212ENST00000591782 HOXD11P31277 338 aaPredicted RBP12.02□□□□□ -0.49
VMP1-212ENST00000591782 SLC4A1APQ9BWU0 796 aaKnown RBP11.97□□□□□ -0.49
VMP1-212ENST00000591782 DNAJC5BQ9UF47 199 aa11.84□□□□□ -0.51
VMP1-212ENST00000591782 EHMT2Q96KQ7 1210 aa11.76□□□□□ -0.53
VMP1-212ENST00000591782 POTEDQ86YR6 584 aa11.75□□□□□ -0.53
VMP1-212ENST00000591782 DCAF8L1A6NGE4 600 aa11.72□□□□□ -0.53
VMP1-212ENST00000591782 ZBTB22O15209 634 aa11.57□□□□□ -0.56
VMP1-212ENST00000591782 CSRNP3Q8WYN3 585 aa11.57□□□□□ -0.56
VMP1-212ENST00000591782 SLC4A2P04920 1241 aa11.56□□□□□ -0.56
VMP1-212ENST00000591782 FOXD4L1Q9NU39 408 aa11.52□□□□□ -0.57
VMP1-212ENST00000591782 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.45□□□□□ -0.582e-6■□□□□ 8.1
VMP1-212ENST00000591782 MYCNP04198 464 aaPredicted RBP11.31□□□□□ -0.6
VMP1-212ENST00000591782 U3KPZ7 1027 aaPredicted RBP11.3□□□□□ -0.6
VMP1-212ENST00000591782 RNF39Q9H2S5 420 aa11.2□□□□□ -0.62
VMP1-212ENST00000591782 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.14□□□□□ -0.63
VMP1-212ENST00000591782 HNRNPUL2Q1KMD3 747 aaKnown RBP11.14□□□□□ -0.63
VMP1-212ENST00000591782 SAMD1Q6SPF0 538 aaPredicted RBP11.11□□□□□ -0.63
VMP1-212ENST00000591782 ATXN8OSP0DMR3 200 aa11.08□□□□□ -0.64
VMP1-212ENST00000591782 C1QBPQ07021 282 aaKnown RBP11.05□□□□□ -0.64
VMP1-212ENST00000591782 ATF5Q9Y2D1 282 aaPredicted RBP11.03□□□□□ -0.64
VMP1-212ENST00000591782 APLP2Q06481 763 aa11□□□□□ -0.65
VMP1-212ENST00000591782 SPINK5Q9NQ38 1064 aaPredicted RBP10.96□□□□□ -0.65
VMP1-212ENST00000591782 CAPN15O75808 1086 aa10.91□□□□□ -0.66
VMP1-212ENST00000591782 TRHP20396 242 aaPredicted RBP10.88□□□□□ -0.67
VMP1-212ENST00000591782 ZNF219Q9P2Y4 722 aaPredicted RBP10.85□□□□□ -0.67
VMP1-212ENST00000591782 CACNB1Q02641 598 aaPredicted RBP10.84□□□□□ -0.67
VMP1-212ENST00000591782 ABCB7O75027 752 aa10.72□□□□□ -0.69
VMP1-212ENST00000591782 POLA2Q14181 598 aa10.72□□□□□ -0.69
VMP1-212ENST00000591782 DSG3P32926 999 aa10.69□□□□□ -0.7
VMP1-212ENST00000591782 MKRN4PQ13434 485 aaPredicted RBP10.55□□□□□ -0.72
VMP1-212ENST00000591782 FBLN2P98095 1184 aa10.52□□□□□ -0.73
VMP1-212ENST00000591782 ZBTB12Q9Y330 459 aaPredicted RBP10.51□□□□□ -0.73
VMP1-212ENST00000591782 FKBP8Q14318 412 aa10.45□□□□□ -0.74
VMP1-212ENST00000591782 OSCARQ8IYS5 282 aa10.36□□□□□ -0.75
VMP1-212ENST00000591782 SPDYE4A6NLX3 237 aa10.34□□□□□ -0.75
VMP1-212ENST00000591782 SPDYE2BA6NHP3 402 aa10.24□□□□□ -0.77
VMP1-212ENST00000591782 SPDYE6P0CI01 402 aa10.24□□□□□ -0.77
VMP1-212ENST00000591782 SPDYE2Q495Y8 402 aa10.24□□□□□ -0.77
VMP1-212ENST00000591782 ZNF692Q9BU19 519 aaPredicted RBP10.24□□□□□ -0.77
VMP1-212ENST00000591782 SSUH2Q9Y2M2 353 aa10.19□□□□□ -0.78
VMP1-212ENST00000591782 PROM2Q8N271 834 aa10.18□□□□□ -0.78
VMP1-212ENST00000591782 RBM42Q9BTD8 480 aaKnown RBP10.16□□□□□ -0.78
VMP1-212ENST00000591782 PABPN1Q86U42 306 aaKnown RBP eCLIP10.11□□□□□ -0.79
VMP1-212ENST00000591782 AKT1S1Q96B36 256 aa10.06□□□□□ -0.8
VMP1-212ENST00000591782 FBXO3Q9UK99 471 aa10.02□□□□□ -0.81
VMP1-212ENST00000591782 REM2Q8IYK8 340 aaPredicted RBP9.98□□□□□ -0.81
VMP1-212ENST00000591782 SPDYE1Q8NFV5 336 aaPredicted RBP9.93□□□□□ -0.82
VMP1-212ENST00000591782 STAG3Q9UJ98 1225 aa9.93□□□□□ -0.82
VMP1-212ENST00000591782 VASPP50552 380 aaPredicted RBP9.91□□□□□ -0.82
VMP1-212ENST00000591782 CLEC11AQ9Y240 323 aa9.91□□□□□ -0.82
VMP1-212ENST00000591782 PITPNM1O00562 1244 aa9.88□□□□□ -0.83
VMP1-212ENST00000591782 PRR29P0C7W0 189 aa9.81□□□□□ -0.84
VMP1-212ENST00000591782 MIER1Q8N108 512 aa9.8□□□□□ -0.84
VMP1-212ENST00000591782 IFNLR1Q8IU57 520 aaPredicted RBP9.79□□□□□ -0.84
VMP1-212ENST00000591782 PLCD3Q8N3E9 789 aa9.79□□□□□ -0.84
VMP1-212ENST00000591782 CHRDL2Q6WN34 429 aa9.73□□□□□ -0.85
VMP1-212ENST00000591782 CREBZFQ9NS37 354 aa9.72□□□□□ -0.85
VMP1-212ENST00000591782 PLEKHG5O94827 1062 aa9.71□□□□□ -0.86
VMP1-212ENST00000591782 KLHL34Q8N239 644 aa9.71□□□□□ -0.86
VMP1-212ENST00000591782 AMER1Q5JTC6 1135 aaPredicted RBP9.67□□□□□ -0.86
VMP1-212ENST00000591782 RTN4Q9NQC3 1192 aaKnown RBP9.67□□□□□ -0.86
VMP1-212ENST00000591782 FXR2P51116 673 aaKnown RBP eCLIP9.66□□□□□ -0.86
VMP1-212ENST00000591782 CHADLQ6NUI6 762 aa9.66□□□□□ -0.86
VMP1-212ENST00000591782 ZBTB47Q9UFB7 747 aaPredicted RBP9.66□□□□□ -0.86
VMP1-212ENST00000591782 PRKAR2AP13861 404 aaKnown RBP9.63□□□□□ -0.87
VMP1-212ENST00000591782 MNX1P50219 401 aaPredicted RBP9.63□□□□□ -0.87
VMP1-212ENST00000591782 PIP4P2Q8N4L2 257 aa9.63□□□□□ -0.87
VMP1-212ENST00000591782 SPOCK2Q92563 424 aa9.63□□□□□ -0.87
VMP1-212ENST00000591782 FARP1Q9Y4F1 1045 aaPredicted RBP9.56□□□□□ -0.88
VMP1-212ENST00000591782 NUBP1P53384 320 aa9.54□□□□□ -0.88
VMP1-212ENST00000591782 NPM1P06748 294 aaKnown RBP eCLIP9.53□□□□□ -0.88
VMP1-212ENST00000591782 PKD2Q13563 968 aa9.5□□□□□ -0.89
VMP1-212ENST00000591782 RASEFQ8IZ41 740 aa9.49□□□□□ -0.89
VMP1-212ENST00000591782 CIZ1Q9ULV3 898 aaPredicted RBP9.49□□□□□ -0.89
VMP1-212ENST00000591782 DCAF8Q5TAQ9 597 aa9.45□□□□□ -0.9
VMP1-212ENST00000591782 FAM212AQ96EL1 285 aa9.45□□□□□ -0.9
VMP1-212ENST00000591782 GSE1Q14687 1217 aa9.44□□□□□ -0.9
VMP1-212ENST00000591782 ECM2O94769 699 aaPredicted RBP9.42□□□□□ -0.9
VMP1-212ENST00000591782 TSPYL2Q9H2G4 693 aaPredicted RBP9.41□□□□□ -0.9
VMP1-212ENST00000591782 TRIM41Q8WV44 630 aa9.36□□□□□ -0.91
VMP1-212ENST00000591782 PAK3O75914 559 aaPredicted RBP9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms