Protein–RNA interactions for Protein: O95475

SIX6, Homeobox protein SIX6, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX6O95475 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
SIX6O95475 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC14.69□□□□□ -0.06
SIX6O95475 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC14.69□□□□□ -0.06
SIX6O95475 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
SIX6O95475 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC14.69□□□□□ -0.06
SIX6O95475 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC14.69□□□□□ -0.06
SIX6O95475 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
SIX6O95475 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
SIX6O95475 CKBP1-201ENST00000565489 1086 ntBASIC14.69□□□□□ -0.06
SIX6O95475 VPS53-216ENST00000574029 585 ntTSL 4 BASIC14.69□□□□□ -0.06
SIX6O95475 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
SIX6O95475 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
SIX6O95475 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
SIX6O95475 AL050303.2-201ENST00000619798 666 ntBASIC14.69□□□□□ -0.06
SIX6O95475 AC131212.4-201ENST00000623606 975 ntBASIC14.69□□□□□ -0.06
SIX6O95475 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
SIX6O95475 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC14.69□□□□□ -0.06
SIX6O95475 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC14.69□□□□□ -0.06
SIX6O95475 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
SIX6O95475 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC14.69□□□□□ -0.06
SIX6O95475 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
SIX6O95475 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
SIX6O95475 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
SIX6O95475 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
SIX6O95475 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
SIX6O95475 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
SIX6O95475 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
SIX6O95475 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
SIX6O95475 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
SIX6O95475 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
SIX6O95475 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
SIX6O95475 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC14.69□□□□□ -0.06
SIX6O95475 AP002414.2-201ENST00000591780 3365 ntBASIC14.69□□□□□ -0.06
SIX6O95475 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
SIX6O95475 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
SIX6O95475 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
SIX6O95475 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC14.69□□□□□ -0.06
SIX6O95475 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC14.69□□□□□ -0.06
SIX6O95475 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
SIX6O95475 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC14.68□□□□□ -0.06
SIX6O95475 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
SIX6O95475 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
SIX6O95475 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SIX6O95475 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC14.68□□□□□ -0.06
SIX6O95475 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC14.68□□□□□ -0.06
SIX6O95475 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SIX6O95475 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SIX6O95475 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SIX6O95475 AC016396.2-201ENST00000562575 1417 ntBASIC14.68□□□□□ -0.06
SIX6O95475 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
SIX6O95475 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC14.68□□□□□ -0.06
SIX6O95475 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC14.68□□□□□ -0.06
SIX6O95475 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SIX6O95475 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC14.68□□□□□ -0.06
SIX6O95475 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
SIX6O95475 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SIX6O95475 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SIX6O95475 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SIX6O95475 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC14.68□□□□□ -0.06
SIX6O95475 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC14.68□□□□□ -0.06
SIX6O95475 METTL26-203ENST00000397664 604 ntTSL 2 BASIC14.68□□□□□ -0.06
SIX6O95475 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
SIX6O95475 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
SIX6O95475 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC14.68□□□□□ -0.06
SIX6O95475 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC14.68□□□□□ -0.06
SIX6O95475 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
SIX6O95475 NAT14-202ENST00000587400 416 ntTSL 5 BASIC14.68□□□□□ -0.06
SIX6O95475 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC14.68□□□□□ -0.06
SIX6O95475 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
SIX6O95475 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SIX6O95475 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
SIX6O95475 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
SIX6O95475 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
SIX6O95475 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SIX6O95475 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SIX6O95475 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC14.68□□□□□ -0.06
SIX6O95475 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
SIX6O95475 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SIX6O95475 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC14.68□□□□□ -0.06
SIX6O95475 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
SIX6O95475 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
SIX6O95475 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
SIX6O95475 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SIX6O95475 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
SIX6O95475 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
SIX6O95475 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SIX6O95475 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
SIX6O95475 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC14.68□□□□□ -0.06
SIX6O95475 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
SIX6O95475 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SIX6O95475 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
SIX6O95475 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
SIX6O95475 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
SIX6O95475 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
SIX6O95475 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC14.67□□□□□ -0.06
SIX6O95475 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
SIX6O95475 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
SIX6O95475 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SIX6O95475 AC092053.1-201ENST00000605787 1936 ntBASIC14.67□□□□□ -0.06
SIX6O95475 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC14.67□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms