Protein–RNA interactions for Protein: O00299

CLIC1, Chloride intracellular channel protein 1, humanhuman

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC1O00299 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
CLIC1O00299 AMT-250ENST00000637682 1823 ntTSL 5 BASIC16.52■□□□□ 0.23
CLIC1O00299 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC16.52■□□□□ 0.23
CLIC1O00299 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
CLIC1O00299 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CLIC1O00299 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CLIC1O00299 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CLIC1O00299 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC16.51■□□□□ 0.23
CLIC1O00299 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
CLIC1O00299 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CLIC1O00299 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
CLIC1O00299 AC097374.2-201ENST00000618617 1306 ntBASIC16.51■□□□□ 0.23
CLIC1O00299 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC16.51■□□□□ 0.23
CLIC1O00299 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CLIC1O00299 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CLIC1O00299 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
CLIC1O00299 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC16.51■□□□□ 0.23
CLIC1O00299 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC16.51■□□□□ 0.23
CLIC1O00299 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC16.51■□□□□ 0.23
CLIC1O00299 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CLIC1O00299 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC16.51■□□□□ 0.23
CLIC1O00299 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
CLIC1O00299 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
CLIC1O00299 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
CLIC1O00299 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC16.51■□□□□ 0.23
CLIC1O00299 AL137013.1-201ENST00000432946 1228 ntBASIC16.51■□□□□ 0.23
CLIC1O00299 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
CLIC1O00299 CNP-204ENST00000472031 1019 ntTSL 2 BASIC16.51■□□□□ 0.23
CLIC1O00299 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CLIC1O00299 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CLIC1O00299 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
CLIC1O00299 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CLIC1O00299 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC16.51■□□□□ 0.23
CLIC1O00299 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC16.51■□□□□ 0.23
CLIC1O00299 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC16.51■□□□□ 0.23
CLIC1O00299 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
CLIC1O00299 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CLIC1O00299 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
CLIC1O00299 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
CLIC1O00299 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CLIC1O00299 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC16.51■□□□□ 0.23
CLIC1O00299 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CLIC1O00299 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CLIC1O00299 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC16.51■□□□□ 0.23
CLIC1O00299 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
CLIC1O00299 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CLIC1O00299 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
CLIC1O00299 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CLIC1O00299 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CLIC1O00299 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CLIC1O00299 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CLIC1O00299 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
CLIC1O00299 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
CLIC1O00299 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CLIC1O00299 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CLIC1O00299 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CLIC1O00299 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC16.5■□□□□ 0.23
CLIC1O00299 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CLIC1O00299 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC16.5■□□□□ 0.23
CLIC1O00299 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC16.5■□□□□ 0.23
CLIC1O00299 HBZP1-201ENST00000354915 429 ntBASIC16.5■□□□□ 0.23
CLIC1O00299 COX5BP2-201ENST00000392354 334 ntBASIC16.5■□□□□ 0.23
CLIC1O00299 AL359075.1-203ENST00000462729 1002 ntBASIC16.5■□□□□ 0.23
CLIC1O00299 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC16.5■□□□□ 0.23
CLIC1O00299 AC005332.3-201ENST00000589904 676 ntBASIC16.5■□□□□ 0.23
CLIC1O00299 AC005363.2-201ENST00000618631 242 ntBASIC16.5■□□□□ 0.23
CLIC1O00299 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CLIC1O00299 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CLIC1O00299 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CLIC1O00299 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CLIC1O00299 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CLIC1O00299 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CLIC1O00299 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CLIC1O00299 CROCCP1-201ENST00000426910 5675 ntBASIC16.5■□□□□ 0.23
CLIC1O00299 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CLIC1O00299 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CLIC1O00299 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC16.5■□□□□ 0.23
CLIC1O00299 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CLIC1O00299 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
CLIC1O00299 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CLIC1O00299 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
CLIC1O00299 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
CLIC1O00299 AC046185.3-201ENST00000623228 1824 ntBASIC16.49■□□□□ 0.23
CLIC1O00299 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC16.49■□□□□ 0.23
CLIC1O00299 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC16.49■□□□□ 0.23
CLIC1O00299 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CLIC1O00299 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CLIC1O00299 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC16.49■□□□□ 0.23
CLIC1O00299 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CLIC1O00299 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CLIC1O00299 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
CLIC1O00299 TNRC18P3-201ENST00000441896 2691 ntBASIC16.49■□□□□ 0.23
CLIC1O00299 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CLIC1O00299 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CLIC1O00299 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC16.49■□□□□ 0.23
CLIC1O00299 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC16.49■□□□□ 0.23
CLIC1O00299 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC16.49■□□□□ 0.23
CLIC1O00299 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
CLIC1O00299 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC16.49■□□□□ 0.23
CLIC1O00299 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC16.49■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms