Protein–RNA interactions for Protein: Q9Y5I1

PCDHA11, Protocadherin alpha-11, humanhuman

Predictions only

Length 949 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA11Q9Y5I1 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC26.76■■□□□ 1.87
PCDHA11Q9Y5I1 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC26.76■■□□□ 1.87
PCDHA11Q9Y5I1 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC26.76■■□□□ 1.87
PCDHA11Q9Y5I1 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC26.76■■□□□ 1.87
PCDHA11Q9Y5I1 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC26.76■■□□□ 1.87
PCDHA11Q9Y5I1 Z92544.1-202ENST00000571933 1220 ntBASIC26.76■■□□□ 1.87
PCDHA11Q9Y5I1 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC26.76■■□□□ 1.87
PCDHA11Q9Y5I1 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC26.76■■□□□ 1.87
PCDHA11Q9Y5I1 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
PCDHA11Q9Y5I1 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
PCDHA11Q9Y5I1 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC26.75■■□□□ 1.87
PCDHA11Q9Y5I1 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC26.75■■□□□ 1.87
PCDHA11Q9Y5I1 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
PCDHA11Q9Y5I1 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
PCDHA11Q9Y5I1 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC26.74■■□□□ 1.87
PCDHA11Q9Y5I1 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC26.74■■□□□ 1.87
PCDHA11Q9Y5I1 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC26.73■■□□□ 1.87
PCDHA11Q9Y5I1 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
PCDHA11Q9Y5I1 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
PCDHA11Q9Y5I1 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC26.73■■□□□ 1.87
PCDHA11Q9Y5I1 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC26.73■■□□□ 1.87
PCDHA11Q9Y5I1 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC26.73■■□□□ 1.87
PCDHA11Q9Y5I1 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC26.72■■□□□ 1.87
PCDHA11Q9Y5I1 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC26.72■■□□□ 1.87
PCDHA11Q9Y5I1 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
PCDHA11Q9Y5I1 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC26.72■■□□□ 1.87
PCDHA11Q9Y5I1 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC26.72■■□□□ 1.87
PCDHA11Q9Y5I1 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC26.71■■□□□ 1.87
PCDHA11Q9Y5I1 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC26.71■■□□□ 1.87
PCDHA11Q9Y5I1 TK2-216ENST00000564917 1156 ntTSL 3 BASIC26.7■■□□□ 1.86
PCDHA11Q9Y5I1 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC26.7■■□□□ 1.86
PCDHA11Q9Y5I1 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC26.69■■□□□ 1.86
PCDHA11Q9Y5I1 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC26.69■■□□□ 1.86
PCDHA11Q9Y5I1 GRAMD4P7-201ENST00000578182 1232 ntBASIC26.69■■□□□ 1.86
PCDHA11Q9Y5I1 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC26.69■■□□□ 1.86
PCDHA11Q9Y5I1 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
PCDHA11Q9Y5I1 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
PCDHA11Q9Y5I1 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
PCDHA11Q9Y5I1 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
PCDHA11Q9Y5I1 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC26.68■■□□□ 1.86
PCDHA11Q9Y5I1 CREM-229ENST00000474362 1030 ntTSL 2 BASIC26.68■■□□□ 1.86
PCDHA11Q9Y5I1 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC26.67■■□□□ 1.86
PCDHA11Q9Y5I1 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
PCDHA11Q9Y5I1 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC26.67■■□□□ 1.86
PCDHA11Q9Y5I1 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC26.67■■□□□ 1.86
PCDHA11Q9Y5I1 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
PCDHA11Q9Y5I1 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
PCDHA11Q9Y5I1 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC26.66■■□□□ 1.86
PCDHA11Q9Y5I1 PEMT-206ENST00000435340 960 ntTSL 5 BASIC26.66■■□□□ 1.86
PCDHA11Q9Y5I1 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC26.66■■□□□ 1.86
PCDHA11Q9Y5I1 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC26.66■■□□□ 1.86
PCDHA11Q9Y5I1 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
PCDHA11Q9Y5I1 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
PCDHA11Q9Y5I1 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC26.65■■□□□ 1.86
PCDHA11Q9Y5I1 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
PCDHA11Q9Y5I1 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC26.64■■□□□ 1.86
PCDHA11Q9Y5I1 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
PCDHA11Q9Y5I1 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
PCDHA11Q9Y5I1 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
PCDHA11Q9Y5I1 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.85
PCDHA11Q9Y5I1 AC087393.1-201ENST00000582896 145 ntBASIC26.63■■□□□ 1.85
PCDHA11Q9Y5I1 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
PCDHA11Q9Y5I1 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
PCDHA11Q9Y5I1 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC26.61■■□□□ 1.85
PCDHA11Q9Y5I1 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC26.61■■□□□ 1.85
PCDHA11Q9Y5I1 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC26.61■■□□□ 1.85
PCDHA11Q9Y5I1 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
PCDHA11Q9Y5I1 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
PCDHA11Q9Y5I1 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC26.6■■□□□ 1.85
PCDHA11Q9Y5I1 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
PCDHA11Q9Y5I1 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC26.6■■□□□ 1.85
PCDHA11Q9Y5I1 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC26.6■■□□□ 1.85
PCDHA11Q9Y5I1 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC26.59■■□□□ 1.85
PCDHA11Q9Y5I1 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC26.59■■□□□ 1.85
PCDHA11Q9Y5I1 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
PCDHA11Q9Y5I1 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC26.59■■□□□ 1.85
PCDHA11Q9Y5I1 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC26.58■■□□□ 1.85
PCDHA11Q9Y5I1 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC26.58■■□□□ 1.85
PCDHA11Q9Y5I1 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
PCDHA11Q9Y5I1 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
PCDHA11Q9Y5I1 KRT125P-201ENST00000546827 989 ntBASIC26.58■■□□□ 1.85
PCDHA11Q9Y5I1 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC26.58■■□□□ 1.85
PCDHA11Q9Y5I1 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC26.58■■□□□ 1.85
PCDHA11Q9Y5I1 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
PCDHA11Q9Y5I1 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC26.58■■□□□ 1.85
PCDHA11Q9Y5I1 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC26.57■■□□□ 1.84
PCDHA11Q9Y5I1 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
PCDHA11Q9Y5I1 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC26.57■■□□□ 1.84
PCDHA11Q9Y5I1 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC26.57■■□□□ 1.84
PCDHA11Q9Y5I1 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
PCDHA11Q9Y5I1 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
PCDHA11Q9Y5I1 AL359504.2-201ENST00000605506 1601 ntBASIC26.57■■□□□ 1.84
PCDHA11Q9Y5I1 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
PCDHA11Q9Y5I1 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC26.56■■□□□ 1.84
PCDHA11Q9Y5I1 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC26.55■■□□□ 1.84
PCDHA11Q9Y5I1 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC26.55■■□□□ 1.84
PCDHA11Q9Y5I1 MIR638-201ENST00000385237 100 ntBASIC26.55■■□□□ 1.84
PCDHA11Q9Y5I1 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC26.55■■□□□ 1.84
PCDHA11Q9Y5I1 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC26.55■■□□□ 1.84
PCDHA11Q9Y5I1 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC26.55■■□□□ 1.84
Retrieved 100 of 98,524 protein–RNA pairs in 52.3 ms