Protein–RNA interactions for Protein: Q9Y5G9

PCDHGA4, Protocadherin gamma-A4, humanhuman

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA4Q9Y5G9 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC23.81■■□□□ 1.4
PCDHGA4Q9Y5G9 MED25-210ENST00000612854 801 ntTSL 5 BASIC23.81■■□□□ 1.4
PCDHGA4Q9Y5G9 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
PCDHGA4Q9Y5G9 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
PCDHGA4Q9Y5G9 MED25-214ENST00000622402 642 ntTSL 5 BASIC23.81■■□□□ 1.4
PCDHGA4Q9Y5G9 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC23.81■■□□□ 1.4
PCDHGA4Q9Y5G9 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
PCDHGA4Q9Y5G9 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
PCDHGA4Q9Y5G9 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
PCDHGA4Q9Y5G9 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
PCDHGA4Q9Y5G9 AC126177.7-201ENST00000547904 679 ntBASIC23.8■■□□□ 1.4
PCDHGA4Q9Y5G9 WHAMMP3-201ENST00000611636 1609 ntBASIC23.8■■□□□ 1.4
PCDHGA4Q9Y5G9 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
PCDHGA4Q9Y5G9 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
PCDHGA4Q9Y5G9 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC23.79■■□□□ 1.4
PCDHGA4Q9Y5G9 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
PCDHGA4Q9Y5G9 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
PCDHGA4Q9Y5G9 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC23.79■■□□□ 1.4
PCDHGA4Q9Y5G9 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
PCDHGA4Q9Y5G9 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC23.78■■□□□ 1.4
PCDHGA4Q9Y5G9 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
PCDHGA4Q9Y5G9 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC23.78■■□□□ 1.4
PCDHGA4Q9Y5G9 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
PCDHGA4Q9Y5G9 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC23.78■■□□□ 1.4
PCDHGA4Q9Y5G9 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC23.78■■□□□ 1.4
PCDHGA4Q9Y5G9 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC23.77■■□□□ 1.4
PCDHGA4Q9Y5G9 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
PCDHGA4Q9Y5G9 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
PCDHGA4Q9Y5G9 PKM-203ENST00000389093 2279 ntTSL 5 BASIC23.76■■□□□ 1.39
PCDHGA4Q9Y5G9 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC23.76■■□□□ 1.39
PCDHGA4Q9Y5G9 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
PCDHGA4Q9Y5G9 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
PCDHGA4Q9Y5G9 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC23.76■■□□□ 1.39
PCDHGA4Q9Y5G9 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
PCDHGA4Q9Y5G9 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC23.76■■□□□ 1.39
PCDHGA4Q9Y5G9 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
PCDHGA4Q9Y5G9 AL359258.2-201ENST00000564063 1566 ntBASIC23.75■■□□□ 1.39
PCDHGA4Q9Y5G9 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
PCDHGA4Q9Y5G9 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
PCDHGA4Q9Y5G9 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
PCDHGA4Q9Y5G9 AL449106.1-201ENST00000608517 1980 ntBASIC23.74■■□□□ 1.39
PCDHGA4Q9Y5G9 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC23.74■■□□□ 1.39
PCDHGA4Q9Y5G9 MOB2-207ENST00000614710 705 ntTSL 5 BASIC23.74■■□□□ 1.39
PCDHGA4Q9Y5G9 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
PCDHGA4Q9Y5G9 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC23.74■■□□□ 1.39
PCDHGA4Q9Y5G9 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
PCDHGA4Q9Y5G9 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
PCDHGA4Q9Y5G9 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
PCDHGA4Q9Y5G9 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
PCDHGA4Q9Y5G9 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC23.73■■□□□ 1.39
PCDHGA4Q9Y5G9 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC23.73■■□□□ 1.39
PCDHGA4Q9Y5G9 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC23.73■■□□□ 1.39
PCDHGA4Q9Y5G9 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC23.72■■□□□ 1.39
PCDHGA4Q9Y5G9 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC23.72■■□□□ 1.39
PCDHGA4Q9Y5G9 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC23.72■■□□□ 1.39
PCDHGA4Q9Y5G9 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
PCDHGA4Q9Y5G9 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC23.72■■□□□ 1.39
PCDHGA4Q9Y5G9 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
PCDHGA4Q9Y5G9 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC23.71■■□□□ 1.39
PCDHGA4Q9Y5G9 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC23.71■■□□□ 1.39
PCDHGA4Q9Y5G9 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC23.71■■□□□ 1.39
PCDHGA4Q9Y5G9 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC23.71■■□□□ 1.39
PCDHGA4Q9Y5G9 AL157400.5-201ENST00000507624 621 ntBASIC23.71■■□□□ 1.39
PCDHGA4Q9Y5G9 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC23.7■■□□□ 1.39
PCDHGA4Q9Y5G9 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC23.7■■□□□ 1.38
PCDHGA4Q9Y5G9 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC23.69■■□□□ 1.38
PCDHGA4Q9Y5G9 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC23.69■■□□□ 1.38
PCDHGA4Q9Y5G9 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
PCDHGA4Q9Y5G9 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC23.69■■□□□ 1.38
PCDHGA4Q9Y5G9 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC23.69■■□□□ 1.38
PCDHGA4Q9Y5G9 AC129492.7-201ENST00000622992 756 ntBASIC23.69■■□□□ 1.38
PCDHGA4Q9Y5G9 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC23.68■■□□□ 1.38
PCDHGA4Q9Y5G9 CREM-210ENST00000374721 2020 ntTSL 5 BASIC23.68■■□□□ 1.38
PCDHGA4Q9Y5G9 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC23.68■■□□□ 1.38
PCDHGA4Q9Y5G9 HES4-204ENST00000484667 667 ntTSL 3 BASIC23.68■■□□□ 1.38
PCDHGA4Q9Y5G9 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC23.68■■□□□ 1.38
PCDHGA4Q9Y5G9 AC007029.1-201ENST00000604183 313 ntBASIC23.68■■□□□ 1.38
PCDHGA4Q9Y5G9 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
PCDHGA4Q9Y5G9 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
PCDHGA4Q9Y5G9 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC23.68■■□□□ 1.38
PCDHGA4Q9Y5G9 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC23.67■■□□□ 1.38
PCDHGA4Q9Y5G9 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
PCDHGA4Q9Y5G9 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC23.67■■□□□ 1.38
PCDHGA4Q9Y5G9 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC23.67■■□□□ 1.38
PCDHGA4Q9Y5G9 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
PCDHGA4Q9Y5G9 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC23.67■■□□□ 1.38
PCDHGA4Q9Y5G9 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
PCDHGA4Q9Y5G9 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
PCDHGA4Q9Y5G9 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC23.66■■□□□ 1.38
PCDHGA4Q9Y5G9 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
PCDHGA4Q9Y5G9 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
PCDHGA4Q9Y5G9 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC23.65■■□□□ 1.38
PCDHGA4Q9Y5G9 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC23.65■■□□□ 1.38
PCDHGA4Q9Y5G9 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC23.65■■□□□ 1.38
PCDHGA4Q9Y5G9 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
PCDHGA4Q9Y5G9 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
PCDHGA4Q9Y5G9 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC23.65■■□□□ 1.38
PCDHGA4Q9Y5G9 DUX4L18-201ENST00000553347 1267 ntBASIC23.65■■□□□ 1.38
PCDHGA4Q9Y5G9 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC23.65■■□□□ 1.38
PCDHGA4Q9Y5G9 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC23.65■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 95.5 ms