Protein–RNA interactions for Protein: Q9UMX0

UBQLN1, Ubiquilin-1, humanhuman

Known RBP Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN1Q9UMX0 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
UBQLN1Q9UMX0 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC26.31■■□□□ 1.8
UBQLN1Q9UMX0 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC26.31■■□□□ 1.8
UBQLN1Q9UMX0 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC26.31■■□□□ 1.8
UBQLN1Q9UMX0 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC26.31■■□□□ 1.8
UBQLN1Q9UMX0 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
UBQLN1Q9UMX0 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
UBQLN1Q9UMX0 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
UBQLN1Q9UMX0 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
UBQLN1Q9UMX0 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC26.29■■□□□ 1.8
UBQLN1Q9UMX0 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC26.29■■□□□ 1.8
UBQLN1Q9UMX0 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC26.29■■□□□ 1.8
UBQLN1Q9UMX0 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC26.29■■□□□ 1.8
UBQLN1Q9UMX0 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC26.29■■□□□ 1.8
UBQLN1Q9UMX0 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC26.28■■□□□ 1.8
UBQLN1Q9UMX0 DUX4L9-201ENST00000449051 1259 ntBASIC26.28■■□□□ 1.8
UBQLN1Q9UMX0 SPCS2P3-201ENST00000500401 656 ntBASIC26.28■■□□□ 1.8
UBQLN1Q9UMX0 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
UBQLN1Q9UMX0 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
UBQLN1Q9UMX0 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC26.27■■□□□ 1.8
UBQLN1Q9UMX0 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC26.26■■□□□ 1.79
UBQLN1Q9UMX0 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
UBQLN1Q9UMX0 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC26.26■■□□□ 1.79
UBQLN1Q9UMX0 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
UBQLN1Q9UMX0 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC26.26■■□□□ 1.79
UBQLN1Q9UMX0 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
UBQLN1Q9UMX0 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
UBQLN1Q9UMX0 GUK1-208ENST00000366728 842 ntTSL 2 BASIC26.26■■□□□ 1.79
UBQLN1Q9UMX0 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC26.26■■□□□ 1.79
UBQLN1Q9UMX0 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC26.26■■□□□ 1.79
UBQLN1Q9UMX0 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
UBQLN1Q9UMX0 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC26.26■■□□□ 1.79
UBQLN1Q9UMX0 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
UBQLN1Q9UMX0 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
UBQLN1Q9UMX0 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC26.26■■□□□ 1.79
UBQLN1Q9UMX0 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
UBQLN1Q9UMX0 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC26.26■■□□□ 1.79
UBQLN1Q9UMX0 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC26.25■■□□□ 1.79
UBQLN1Q9UMX0 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC26.25■■□□□ 1.79
UBQLN1Q9UMX0 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
UBQLN1Q9UMX0 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
UBQLN1Q9UMX0 DUX4L18-201ENST00000553347 1267 ntBASIC26.24■■□□□ 1.79
UBQLN1Q9UMX0 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
UBQLN1Q9UMX0 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
UBQLN1Q9UMX0 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
UBQLN1Q9UMX0 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
UBQLN1Q9UMX0 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
UBQLN1Q9UMX0 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
UBQLN1Q9UMX0 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC26.23■■□□□ 1.79
UBQLN1Q9UMX0 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
UBQLN1Q9UMX0 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
UBQLN1Q9UMX0 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
UBQLN1Q9UMX0 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC26.23■■□□□ 1.79
UBQLN1Q9UMX0 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC26.23■■□□□ 1.79
UBQLN1Q9UMX0 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC26.22■■□□□ 1.79
UBQLN1Q9UMX0 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
UBQLN1Q9UMX0 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC26.22■■□□□ 1.79
UBQLN1Q9UMX0 AC018755.3-202ENST00000596210 929 ntBASIC26.22■■□□□ 1.79
UBQLN1Q9UMX0 MIR6765-201ENST00000614092 87 ntBASIC26.22■■□□□ 1.79
UBQLN1Q9UMX0 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
UBQLN1Q9UMX0 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
UBQLN1Q9UMX0 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
UBQLN1Q9UMX0 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC26.21■■□□□ 1.79
UBQLN1Q9UMX0 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC26.21■■□□□ 1.79
UBQLN1Q9UMX0 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC26.21■■□□□ 1.79
UBQLN1Q9UMX0 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC26.21■■□□□ 1.79
UBQLN1Q9UMX0 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC26.21■■□□□ 1.79
UBQLN1Q9UMX0 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC26.21■■□□□ 1.79
UBQLN1Q9UMX0 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
UBQLN1Q9UMX0 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
UBQLN1Q9UMX0 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC26.2■■□□□ 1.79
UBQLN1Q9UMX0 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC26.2■■□□□ 1.79
UBQLN1Q9UMX0 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC26.2■■□□□ 1.78
UBQLN1Q9UMX0 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC26.2■■□□□ 1.78
UBQLN1Q9UMX0 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC26.2■■□□□ 1.78
UBQLN1Q9UMX0 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC26.19■■□□□ 1.78
UBQLN1Q9UMX0 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
UBQLN1Q9UMX0 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC26.19■■□□□ 1.78
UBQLN1Q9UMX0 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC26.19■■□□□ 1.78
UBQLN1Q9UMX0 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC26.19■■□□□ 1.78
UBQLN1Q9UMX0 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC26.19■■□□□ 1.78
UBQLN1Q9UMX0 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC26.19■■□□□ 1.78
UBQLN1Q9UMX0 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
UBQLN1Q9UMX0 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
UBQLN1Q9UMX0 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
UBQLN1Q9UMX0 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC26.18■■□□□ 1.78
UBQLN1Q9UMX0 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
UBQLN1Q9UMX0 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC26.18■■□□□ 1.78
UBQLN1Q9UMX0 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
UBQLN1Q9UMX0 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
UBQLN1Q9UMX0 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
UBQLN1Q9UMX0 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
UBQLN1Q9UMX0 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC26.17■■□□□ 1.78
UBQLN1Q9UMX0 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC26.17■■□□□ 1.78
UBQLN1Q9UMX0 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC26.16■■□□□ 1.78
UBQLN1Q9UMX0 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC26.16■■□□□ 1.78
UBQLN1Q9UMX0 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC26.16■■□□□ 1.78
UBQLN1Q9UMX0 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC26.16■■□□□ 1.78
UBQLN1Q9UMX0 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
UBQLN1Q9UMX0 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC26.16■■□□□ 1.78
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms