Protein–RNA interactions for Protein: Q9NVV0

TMEM38B, Trimeric intracellular cation channel type B, humanhuman

Predictions only

Length 291 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM38BQ9NVV0 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
TMEM38BQ9NVV0 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
TMEM38BQ9NVV0 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
TMEM38BQ9NVV0 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC21.46■■□□□ 1.03
TMEM38BQ9NVV0 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC21.46■■□□□ 1.03
TMEM38BQ9NVV0 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
TMEM38BQ9NVV0 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
TMEM38BQ9NVV0 CREM-210ENST00000374721 2020 ntTSL 5 BASIC21.46■■□□□ 1.03
TMEM38BQ9NVV0 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
TMEM38BQ9NVV0 SMPD5-203ENST00000639008 1464 ntBASIC21.45■■□□□ 1.03
TMEM38BQ9NVV0 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC21.45■■□□□ 1.02
TMEM38BQ9NVV0 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC21.45■■□□□ 1.02
TMEM38BQ9NVV0 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
TMEM38BQ9NVV0 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC21.45■■□□□ 1.02
TMEM38BQ9NVV0 REST-210ENST00000638187 1334 ntTSL 5 BASIC21.45■■□□□ 1.02
TMEM38BQ9NVV0 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
TMEM38BQ9NVV0 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
TMEM38BQ9NVV0 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
TMEM38BQ9NVV0 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
TMEM38BQ9NVV0 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC21.44■■□□□ 1.02
TMEM38BQ9NVV0 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
TMEM38BQ9NVV0 PFN2-211ENST00000489155 636 ntTSL 4 BASIC21.44■■□□□ 1.02
TMEM38BQ9NVV0 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC21.44■■□□□ 1.02
TMEM38BQ9NVV0 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC21.43■■□□□ 1.02
TMEM38BQ9NVV0 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC21.43■■□□□ 1.02
TMEM38BQ9NVV0 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
TMEM38BQ9NVV0 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
TMEM38BQ9NVV0 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
TMEM38BQ9NVV0 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
TMEM38BQ9NVV0 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC21.42■■□□□ 1.02
TMEM38BQ9NVV0 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
TMEM38BQ9NVV0 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC21.42■■□□□ 1.02
TMEM38BQ9NVV0 MIR3960-201ENST00000583311 91 ntBASIC21.42■■□□□ 1.02
TMEM38BQ9NVV0 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
TMEM38BQ9NVV0 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
TMEM38BQ9NVV0 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC21.41■■□□□ 1.02
TMEM38BQ9NVV0 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC21.41■■□□□ 1.02
TMEM38BQ9NVV0 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC21.41■■□□□ 1.02
TMEM38BQ9NVV0 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
TMEM38BQ9NVV0 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
TMEM38BQ9NVV0 AC091060.1-201ENST00000623524 1766 ntBASIC21.41■■□□□ 1.02
TMEM38BQ9NVV0 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
TMEM38BQ9NVV0 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
TMEM38BQ9NVV0 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
TMEM38BQ9NVV0 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
TMEM38BQ9NVV0 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC21.4■■□□□ 1.02
TMEM38BQ9NVV0 AC092803.2-201ENST00000564287 1899 ntBASIC21.4■■□□□ 1.02
TMEM38BQ9NVV0 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC21.39■■□□□ 1.02
TMEM38BQ9NVV0 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.01
TMEM38BQ9NVV0 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
TMEM38BQ9NVV0 RNF126P1-201ENST00000567452 1320 ntBASIC21.39■■□□□ 1.01
TMEM38BQ9NVV0 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
TMEM38BQ9NVV0 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
TMEM38BQ9NVV0 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC21.39■■□□□ 1.01
TMEM38BQ9NVV0 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC21.39■■□□□ 1.01
TMEM38BQ9NVV0 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC21.39■■□□□ 1.01
TMEM38BQ9NVV0 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC21.38■■□□□ 1.01
TMEM38BQ9NVV0 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC21.38■■□□□ 1.01
TMEM38BQ9NVV0 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC21.38■■□□□ 1.01
TMEM38BQ9NVV0 HSD17B1P1-201ENST00000590052 955 ntBASIC21.38■■□□□ 1.01
TMEM38BQ9NVV0 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC21.38■■□□□ 1.01
TMEM38BQ9NVV0 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
TMEM38BQ9NVV0 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC21.37■■□□□ 1.01
TMEM38BQ9NVV0 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
TMEM38BQ9NVV0 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
TMEM38BQ9NVV0 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC21.37■■□□□ 1.01
TMEM38BQ9NVV0 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC21.36■■□□□ 1.01
TMEM38BQ9NVV0 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
TMEM38BQ9NVV0 AC007029.1-201ENST00000604183 313 ntBASIC21.36■■□□□ 1.01
TMEM38BQ9NVV0 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC21.35■■□□□ 1.01
TMEM38BQ9NVV0 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
TMEM38BQ9NVV0 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
TMEM38BQ9NVV0 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
TMEM38BQ9NVV0 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
TMEM38BQ9NVV0 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
TMEM38BQ9NVV0 RP9P-202ENST00000450133 1212 ntBASIC21.34■■□□□ 1.01
TMEM38BQ9NVV0 AC145676.1-201ENST00000514988 2004 ntBASIC21.34■■□□□ 1.01
TMEM38BQ9NVV0 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
TMEM38BQ9NVV0 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1.01
TMEM38BQ9NVV0 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
TMEM38BQ9NVV0 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
TMEM38BQ9NVV0 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC21.33■■□□□ 1.01
TMEM38BQ9NVV0 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
TMEM38BQ9NVV0 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC21.32■■□□□ 1
TMEM38BQ9NVV0 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC21.32■■□□□ 1
TMEM38BQ9NVV0 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
TMEM38BQ9NVV0 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC21.32■■□□□ 1
TMEM38BQ9NVV0 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
TMEM38BQ9NVV0 DUSP8P4-201ENST00000399538 1761 ntBASIC21.31■■□□□ 1
TMEM38BQ9NVV0 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
TMEM38BQ9NVV0 AC093536.1-201ENST00000569153 554 ntBASIC21.31■■□□□ 1
TMEM38BQ9NVV0 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC21.31■■□□□ 1
TMEM38BQ9NVV0 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC21.31■■□□□ 1
TMEM38BQ9NVV0 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC21.31■■□□□ 1
TMEM38BQ9NVV0 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC21.3■■□□□ 1
TMEM38BQ9NVV0 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
TMEM38BQ9NVV0 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
TMEM38BQ9NVV0 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
TMEM38BQ9NVV0 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC21.3■■□□□ 1
TMEM38BQ9NVV0 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC21.3■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms