Protein–RNA interactions for Protein: Q9H078

CLPB, Caseinolytic peptidase B protein homolog, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPBQ9H078 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
CLPBQ9H078 AC142472.1-201ENST00000612013 1741 ntBASIC24.44■■□□□ 1.5
CLPBQ9H078 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
CLPBQ9H078 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
CLPBQ9H078 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
CLPBQ9H078 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC24.43■■□□□ 1.5
CLPBQ9H078 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC24.43■■□□□ 1.5
CLPBQ9H078 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC24.43■■□□□ 1.5
CLPBQ9H078 SMPD5-203ENST00000639008 1464 ntBASIC24.43■■□□□ 1.5
CLPBQ9H078 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC24.42■■□□□ 1.5
CLPBQ9H078 REST-210ENST00000638187 1334 ntTSL 5 BASIC24.42■■□□□ 1.5
CLPBQ9H078 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC24.42■■□□□ 1.5
CLPBQ9H078 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
CLPBQ9H078 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC24.42■■□□□ 1.5
CLPBQ9H078 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
CLPBQ9H078 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
CLPBQ9H078 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
CLPBQ9H078 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
CLPBQ9H078 AC004987.1-201ENST00000428627 508 ntBASIC24.41■■□□□ 1.5
CLPBQ9H078 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
CLPBQ9H078 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC24.41■■□□□ 1.5
CLPBQ9H078 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
CLPBQ9H078 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC24.39■■□□□ 1.5
CLPBQ9H078 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
CLPBQ9H078 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC24.39■■□□□ 1.5
CLPBQ9H078 AC009831.1-201ENST00000580420 1582 ntBASIC24.39■■□□□ 1.5
CLPBQ9H078 TSPY13P-201ENST00000338964 914 ntBASIC24.39■■□□□ 1.49
CLPBQ9H078 ATP5G2P3-201ENST00000429083 425 ntBASIC24.39■■□□□ 1.49
CLPBQ9H078 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC24.39■■□□□ 1.49
CLPBQ9H078 GFER-205ENST00000569451 517 ntTSL 5 BASIC24.39■■□□□ 1.49
CLPBQ9H078 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
CLPBQ9H078 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC24.38■■□□□ 1.49
CLPBQ9H078 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
CLPBQ9H078 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC24.38■■□□□ 1.49
CLPBQ9H078 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
CLPBQ9H078 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC24.38■■□□□ 1.49
CLPBQ9H078 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
CLPBQ9H078 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC24.38■■□□□ 1.49
CLPBQ9H078 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
CLPBQ9H078 AC025884.2-201ENST00000553429 711 ntBASIC24.38■■□□□ 1.49
CLPBQ9H078 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC24.38■■□□□ 1.49
CLPBQ9H078 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
CLPBQ9H078 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC24.38■■□□□ 1.49
CLPBQ9H078 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC24.37■■□□□ 1.49
CLPBQ9H078 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC24.37■■□□□ 1.49
CLPBQ9H078 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC24.37■■□□□ 1.49
CLPBQ9H078 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC24.37■■□□□ 1.49
CLPBQ9H078 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC24.37■■□□□ 1.49
CLPBQ9H078 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC24.37■■□□□ 1.49
CLPBQ9H078 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC24.37■■□□□ 1.49
CLPBQ9H078 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
CLPBQ9H078 AC133552.2-201ENST00000619106 1032 ntBASIC24.36■■□□□ 1.49
CLPBQ9H078 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
CLPBQ9H078 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
CLPBQ9H078 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC24.35■■□□□ 1.49
CLPBQ9H078 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC24.35■■□□□ 1.49
CLPBQ9H078 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC24.35■■□□□ 1.49
CLPBQ9H078 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
CLPBQ9H078 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC24.35■■□□□ 1.49
CLPBQ9H078 AL592293.1-201ENST00000502889 1188 ntBASIC24.35■■□□□ 1.49
CLPBQ9H078 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
CLPBQ9H078 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
CLPBQ9H078 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
CLPBQ9H078 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
CLPBQ9H078 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
CLPBQ9H078 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
CLPBQ9H078 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
CLPBQ9H078 AC026202.3-201ENST00000600805 1127 ntBASIC24.33■■□□□ 1.49
CLPBQ9H078 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC24.33■■□□□ 1.48
CLPBQ9H078 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC24.32■■□□□ 1.48
CLPBQ9H078 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC24.32■■□□□ 1.48
CLPBQ9H078 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC24.32■■□□□ 1.48
CLPBQ9H078 GUK1-208ENST00000366728 842 ntTSL 2 BASIC24.32■■□□□ 1.48
CLPBQ9H078 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
CLPBQ9H078 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC24.32■■□□□ 1.48
CLPBQ9H078 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC24.32■■□□□ 1.48
CLPBQ9H078 AC129492.7-201ENST00000622992 756 ntBASIC24.32■■□□□ 1.48
CLPBQ9H078 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC24.32■■□□□ 1.48
CLPBQ9H078 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
CLPBQ9H078 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC24.31■■□□□ 1.48
CLPBQ9H078 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC24.31■■□□□ 1.48
CLPBQ9H078 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC24.31■■□□□ 1.48
CLPBQ9H078 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC24.31■■□□□ 1.48
CLPBQ9H078 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC24.31■■□□□ 1.48
CLPBQ9H078 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC24.31■■□□□ 1.48
CLPBQ9H078 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC24.31■■□□□ 1.48
CLPBQ9H078 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
CLPBQ9H078 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC24.3■■□□□ 1.48
CLPBQ9H078 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
CLPBQ9H078 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC24.3■■□□□ 1.48
CLPBQ9H078 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC24.3■■□□□ 1.48
CLPBQ9H078 AL359504.2-201ENST00000605506 1601 ntBASIC24.29■■□□□ 1.48
CLPBQ9H078 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
CLPBQ9H078 RP9P-202ENST00000450133 1212 ntBASIC24.29■■□□□ 1.48
CLPBQ9H078 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
CLPBQ9H078 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC24.29■■□□□ 1.48
CLPBQ9H078 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
CLPBQ9H078 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
CLPBQ9H078 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC24.28■■□□□ 1.48
CLPBQ9H078 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC24.28■■□□□ 1.48
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms