Protein–RNA interactions for Protein: Q8WZA2

RAPGEF4, Rap guanine nucleotide exchange factor 4, humanhuman

Predictions only

Length 1,011 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF4Q8WZA2 GUSBP5-201ENST00000418136 578 ntBASIC32.43■■■□□ 2.78
RAPGEF4Q8WZA2 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC32.43■■■□□ 2.78
RAPGEF4Q8WZA2 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC32.42■■■□□ 2.78
RAPGEF4Q8WZA2 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC32.42■■■□□ 2.78
RAPGEF4Q8WZA2 PRTG-204ENST00000561292 833 ntTSL 3 BASIC32.42■■■□□ 2.78
RAPGEF4Q8WZA2 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC32.41■■■□□ 2.78
RAPGEF4Q8WZA2 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC32.41■■■□□ 2.78
RAPGEF4Q8WZA2 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC32.41■■■□□ 2.78
RAPGEF4Q8WZA2 AC019171.1-201ENST00000601251 1056 ntBASIC32.41■■■□□ 2.78
RAPGEF4Q8WZA2 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC32.41■■■□□ 2.78
RAPGEF4Q8WZA2 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC32.41■■■□□ 2.78
RAPGEF4Q8WZA2 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC32.41■■■□□ 2.78
RAPGEF4Q8WZA2 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC32.41■■■□□ 2.78
RAPGEF4Q8WZA2 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC32.4■■■□□ 2.78
RAPGEF4Q8WZA2 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC32.4■■■□□ 2.78
RAPGEF4Q8WZA2 AL592295.1-201ENST00000400984 884 ntBASIC32.4■■■□□ 2.78
RAPGEF4Q8WZA2 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC32.4■■■□□ 2.78
RAPGEF4Q8WZA2 AC087393.1-201ENST00000582896 145 ntBASIC32.4■■■□□ 2.78
RAPGEF4Q8WZA2 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC32.39■■■□□ 2.78
RAPGEF4Q8WZA2 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC32.39■■■□□ 2.78
RAPGEF4Q8WZA2 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC32.39■■■□□ 2.78
RAPGEF4Q8WZA2 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC32.38■■■□□ 2.77
RAPGEF4Q8WZA2 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC32.37■■■□□ 2.77
RAPGEF4Q8WZA2 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC32.37■■■□□ 2.77
RAPGEF4Q8WZA2 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC32.36■■■□□ 2.77
RAPGEF4Q8WZA2 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC32.36■■■□□ 2.77
RAPGEF4Q8WZA2 AC131212.1-201ENST00000613771 668 ntBASIC32.36■■■□□ 2.77
RAPGEF4Q8WZA2 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC32.36■■■□□ 2.77
RAPGEF4Q8WZA2 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC32.36■■■□□ 2.77
RAPGEF4Q8WZA2 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC32.35■■■□□ 2.77
RAPGEF4Q8WZA2 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC32.35■■■□□ 2.77
RAPGEF4Q8WZA2 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC32.35■■■□□ 2.77
RAPGEF4Q8WZA2 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC32.34■■■□□ 2.77
RAPGEF4Q8WZA2 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC32.34■■■□□ 2.77
RAPGEF4Q8WZA2 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC32.33■■■□□ 2.77
RAPGEF4Q8WZA2 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC32.33■■■□□ 2.77
RAPGEF4Q8WZA2 RPS2P7-201ENST00000447334 885 ntBASIC32.33■■■□□ 2.77
RAPGEF4Q8WZA2 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC32.33■■■□□ 2.77
RAPGEF4Q8WZA2 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC32.33■■■□□ 2.77
RAPGEF4Q8WZA2 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC32.33■■■□□ 2.77
RAPGEF4Q8WZA2 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC32.32■■■□□ 2.76
RAPGEF4Q8WZA2 THA1P-201ENST00000590384 1145 ntBASIC32.32■■■□□ 2.76
RAPGEF4Q8WZA2 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC32.32■■■□□ 2.76
RAPGEF4Q8WZA2 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC32.32■■■□□ 2.76
RAPGEF4Q8WZA2 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC32.31■■■□□ 2.76
RAPGEF4Q8WZA2 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC32.31■■■□□ 2.76
RAPGEF4Q8WZA2 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC32.31■■■□□ 2.76
RAPGEF4Q8WZA2 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC32.31■■■□□ 2.76
RAPGEF4Q8WZA2 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC32.31■■■□□ 2.76
RAPGEF4Q8WZA2 ST7-202ENST00000323984 2142 ntTSL 5 BASIC32.3■■■□□ 2.76
RAPGEF4Q8WZA2 ST7-207ENST00000393449 2127 ntTSL 5 BASIC32.3■■■□□ 2.76
RAPGEF4Q8WZA2 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC32.3■■■□□ 2.76
RAPGEF4Q8WZA2 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC32.3■■■□□ 2.76
RAPGEF4Q8WZA2 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC32.3■■■□□ 2.76
RAPGEF4Q8WZA2 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC32.29■■■□□ 2.76
RAPGEF4Q8WZA2 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC32.29■■■□□ 2.76
RAPGEF4Q8WZA2 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC32.29■■■□□ 2.76
RAPGEF4Q8WZA2 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC32.28■■■□□ 2.76
RAPGEF4Q8WZA2 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC32.28■■■□□ 2.76
RAPGEF4Q8WZA2 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC32.28■■■□□ 2.76
RAPGEF4Q8WZA2 LONRF2P2-201ENST00000439212 571 ntBASIC32.28■■■□□ 2.76
RAPGEF4Q8WZA2 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC32.28■■■□□ 2.76
RAPGEF4Q8WZA2 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC32.28■■■□□ 2.76
RAPGEF4Q8WZA2 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC32.28■■■□□ 2.76
RAPGEF4Q8WZA2 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC32.27■■■□□ 2.76
RAPGEF4Q8WZA2 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC32.27■■■□□ 2.76
RAPGEF4Q8WZA2 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC32.27■■■□□ 2.76
RAPGEF4Q8WZA2 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC32.27■■■□□ 2.76
RAPGEF4Q8WZA2 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC32.26■■■□□ 2.76
RAPGEF4Q8WZA2 RNF146-205ENST00000477776 762 ntTSL 3 BASIC32.26■■■□□ 2.75
RAPGEF4Q8WZA2 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC32.26■■■□□ 2.75
RAPGEF4Q8WZA2 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC32.26■■■□□ 2.75
RAPGEF4Q8WZA2 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC32.26■■■□□ 2.75
RAPGEF4Q8WZA2 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC32.26■■■□□ 2.75
RAPGEF4Q8WZA2 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC32.26■■■□□ 2.75
RAPGEF4Q8WZA2 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC32.25■■■□□ 2.75
RAPGEF4Q8WZA2 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC32.25■■■□□ 2.75
RAPGEF4Q8WZA2 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC32.25■■■□□ 2.75
RAPGEF4Q8WZA2 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC32.25■■■□□ 2.75
RAPGEF4Q8WZA2 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC32.25■■■□□ 2.75
RAPGEF4Q8WZA2 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC32.24■■■□□ 2.75
RAPGEF4Q8WZA2 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC32.24■■■□□ 2.75
RAPGEF4Q8WZA2 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC32.24■■■□□ 2.75
RAPGEF4Q8WZA2 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC32.23■■■□□ 2.75
RAPGEF4Q8WZA2 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC32.23■■■□□ 2.75
RAPGEF4Q8WZA2 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC32.23■■■□□ 2.75
RAPGEF4Q8WZA2 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC32.22■■■□□ 2.75
RAPGEF4Q8WZA2 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC32.22■■■□□ 2.75
RAPGEF4Q8WZA2 AL449106.1-201ENST00000608517 1980 ntBASIC32.22■■■□□ 2.75
RAPGEF4Q8WZA2 AL356441.2-201ENST00000443009 864 ntBASIC32.22■■■□□ 2.75
RAPGEF4Q8WZA2 AC239859.2-201ENST00000444165 318 ntBASIC32.22■■■□□ 2.75
RAPGEF4Q8WZA2 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC32.22■■■□□ 2.75
RAPGEF4Q8WZA2 TK2-216ENST00000564917 1156 ntTSL 3 BASIC32.22■■■□□ 2.75
RAPGEF4Q8WZA2 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC32.22■■■□□ 2.75
RAPGEF4Q8WZA2 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC32.22■■■□□ 2.75
RAPGEF4Q8WZA2 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC32.21■■■□□ 2.75
RAPGEF4Q8WZA2 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC32.21■■■□□ 2.75
RAPGEF4Q8WZA2 MTURN-203ENST00000409688 843 ntTSL 2 BASIC32.21■■■□□ 2.75
RAPGEF4Q8WZA2 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC32.21■■■□□ 2.75
RAPGEF4Q8WZA2 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC32.2■■■□□ 2.75
Retrieved 100 of 98,524 protein–RNA pairs in 16.3 ms