Protein–RNA interactions for Protein: Q8WU17

RNF139, E3 ubiquitin-protein ligase RNF139, humanhuman

Predictions only

Length 664 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF139Q8WU17 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
RNF139Q8WU17 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC25.58■■□□□ 1.69
RNF139Q8WU17 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
RNF139Q8WU17 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
RNF139Q8WU17 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC25.58■■□□□ 1.69
RNF139Q8WU17 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC25.58■■□□□ 1.69
RNF139Q8WU17 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC25.58■■□□□ 1.68
RNF139Q8WU17 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC25.58■■□□□ 1.68
RNF139Q8WU17 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC25.58■■□□□ 1.68
RNF139Q8WU17 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC25.57■■□□□ 1.68
RNF139Q8WU17 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC25.57■■□□□ 1.68
RNF139Q8WU17 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC25.57■■□□□ 1.68
RNF139Q8WU17 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
RNF139Q8WU17 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
RNF139Q8WU17 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC25.57■■□□□ 1.68
RNF139Q8WU17 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC25.56■■□□□ 1.68
RNF139Q8WU17 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
RNF139Q8WU17 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
RNF139Q8WU17 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC25.56■■□□□ 1.68
RNF139Q8WU17 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
RNF139Q8WU17 AC133552.2-201ENST00000619106 1032 ntBASIC25.56■■□□□ 1.68
RNF139Q8WU17 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
RNF139Q8WU17 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
RNF139Q8WU17 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC25.55■■□□□ 1.68
RNF139Q8WU17 AC026202.3-201ENST00000600805 1127 ntBASIC25.55■■□□□ 1.68
RNF139Q8WU17 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
RNF139Q8WU17 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
RNF139Q8WU17 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
RNF139Q8WU17 AC009831.1-201ENST00000580420 1582 ntBASIC25.54■■□□□ 1.68
RNF139Q8WU17 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC25.54■■□□□ 1.68
RNF139Q8WU17 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
RNF139Q8WU17 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC25.53■■□□□ 1.68
RNF139Q8WU17 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
RNF139Q8WU17 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC25.53■■□□□ 1.68
RNF139Q8WU17 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
RNF139Q8WU17 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
RNF139Q8WU17 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC25.53■■□□□ 1.68
RNF139Q8WU17 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
RNF139Q8WU17 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
RNF139Q8WU17 HES4-204ENST00000484667 667 ntTSL 3 BASIC25.52■■□□□ 1.68
RNF139Q8WU17 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC25.52■■□□□ 1.68
RNF139Q8WU17 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
RNF139Q8WU17 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC25.51■■□□□ 1.68
RNF139Q8WU17 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
RNF139Q8WU17 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
RNF139Q8WU17 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC25.51■■□□□ 1.67
RNF139Q8WU17 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC25.51■■□□□ 1.67
RNF139Q8WU17 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC25.51■■□□□ 1.67
RNF139Q8WU17 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC25.51■■□□□ 1.67
RNF139Q8WU17 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC25.51■■□□□ 1.67
RNF139Q8WU17 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC25.51■■□□□ 1.67
RNF139Q8WU17 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
RNF139Q8WU17 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC25.5■■□□□ 1.67
RNF139Q8WU17 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC25.49■■□□□ 1.67
RNF139Q8WU17 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC25.49■■□□□ 1.67
RNF139Q8WU17 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
RNF139Q8WU17 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
RNF139Q8WU17 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC25.49■■□□□ 1.67
RNF139Q8WU17 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
RNF139Q8WU17 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
RNF139Q8WU17 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC25.48■■□□□ 1.67
RNF139Q8WU17 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC25.48■■□□□ 1.67
RNF139Q8WU17 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC25.48■■□□□ 1.67
RNF139Q8WU17 RAP2CP1-202ENST00000605179 643 ntBASIC25.48■■□□□ 1.67
RNF139Q8WU17 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC25.48■■□□□ 1.67
RNF139Q8WU17 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC25.48■■□□□ 1.67
RNF139Q8WU17 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC25.48■■□□□ 1.67
RNF139Q8WU17 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC25.48■■□□□ 1.67
RNF139Q8WU17 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
RNF139Q8WU17 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
RNF139Q8WU17 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC25.47■■□□□ 1.67
RNF139Q8WU17 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC25.47■■□□□ 1.67
RNF139Q8WU17 AL592293.1-201ENST00000502889 1188 ntBASIC25.47■■□□□ 1.67
RNF139Q8WU17 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC25.47■■□□□ 1.67
RNF139Q8WU17 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
RNF139Q8WU17 KRT18P60-201ENST00000312876 1297 ntBASIC25.46■■□□□ 1.67
RNF139Q8WU17 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC25.46■■□□□ 1.67
RNF139Q8WU17 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
RNF139Q8WU17 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC25.46■■□□□ 1.67
RNF139Q8WU17 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.67
RNF139Q8WU17 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
RNF139Q8WU17 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
RNF139Q8WU17 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC25.45■■□□□ 1.66
RNF139Q8WU17 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC25.45■■□□□ 1.66
RNF139Q8WU17 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC25.45■■□□□ 1.66
RNF139Q8WU17 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
RNF139Q8WU17 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
RNF139Q8WU17 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC25.44■■□□□ 1.66
RNF139Q8WU17 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC25.44■■□□□ 1.66
RNF139Q8WU17 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
RNF139Q8WU17 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC25.44■■□□□ 1.66
RNF139Q8WU17 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC25.43■■□□□ 1.66
RNF139Q8WU17 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
RNF139Q8WU17 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC25.43■■□□□ 1.66
RNF139Q8WU17 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
RNF139Q8WU17 AC012354.3-201ENST00000623734 483 ntBASIC25.43■■□□□ 1.66
RNF139Q8WU17 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC25.43■■□□□ 1.66
RNF139Q8WU17 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC25.43■■□□□ 1.66
RNF139Q8WU17 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
RNF139Q8WU17 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC25.42■■□□□ 1.66
Retrieved 100 of 98,524 protein–RNA pairs in 70.3 ms