Protein–RNA interactions for Protein: Q8WU17

RNF139, E3 ubiquitin-protein ligase RNF139, humanhuman

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF139Q8WU17 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
RNF139Q8WU17 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC25.58■■□□□ 1.69
RNF139Q8WU17 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
RNF139Q8WU17 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
RNF139Q8WU17 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC25.58■■□□□ 1.69
RNF139Q8WU17 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC25.58■■□□□ 1.69
RNF139Q8WU17 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC25.58■■□□□ 1.68
RNF139Q8WU17 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC25.58■■□□□ 1.68
RNF139Q8WU17 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC25.58■■□□□ 1.68
RNF139Q8WU17 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC25.57■■□□□ 1.68
RNF139Q8WU17 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC25.57■■□□□ 1.68
RNF139Q8WU17 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC25.57■■□□□ 1.68
RNF139Q8WU17 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
RNF139Q8WU17 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
RNF139Q8WU17 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC25.57■■□□□ 1.68
RNF139Q8WU17 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC25.56■■□□□ 1.68
RNF139Q8WU17 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
RNF139Q8WU17 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
RNF139Q8WU17 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC25.56■■□□□ 1.68
RNF139Q8WU17 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
RNF139Q8WU17 AC133552.2-201ENST00000619106 1032 ntBASIC25.56■■□□□ 1.68
RNF139Q8WU17 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
RNF139Q8WU17 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
RNF139Q8WU17 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC25.55■■□□□ 1.68
RNF139Q8WU17 AC026202.3-201ENST00000600805 1127 ntBASIC25.55■■□□□ 1.68
RNF139Q8WU17 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
RNF139Q8WU17 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
RNF139Q8WU17 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
RNF139Q8WU17 AC009831.1-201ENST00000580420 1582 ntBASIC25.54■■□□□ 1.68
RNF139Q8WU17 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC25.54■■□□□ 1.68
RNF139Q8WU17 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
RNF139Q8WU17 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC25.53■■□□□ 1.68
RNF139Q8WU17 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
RNF139Q8WU17 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC25.53■■□□□ 1.68
RNF139Q8WU17 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
RNF139Q8WU17 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
RNF139Q8WU17 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC25.53■■□□□ 1.68
RNF139Q8WU17 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
RNF139Q8WU17 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
RNF139Q8WU17 HES4-204ENST00000484667 667 ntTSL 3 BASIC25.52■■□□□ 1.68
RNF139Q8WU17 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC25.52■■□□□ 1.68
RNF139Q8WU17 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
RNF139Q8WU17 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC25.51■■□□□ 1.68
RNF139Q8WU17 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
RNF139Q8WU17 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
RNF139Q8WU17 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC25.51■■□□□ 1.67
RNF139Q8WU17 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC25.51■■□□□ 1.67
RNF139Q8WU17 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC25.51■■□□□ 1.67
RNF139Q8WU17 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC25.51■■□□□ 1.67
RNF139Q8WU17 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC25.51■■□□□ 1.67
RNF139Q8WU17 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC25.51■■□□□ 1.67
RNF139Q8WU17 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
RNF139Q8WU17 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC25.5■■□□□ 1.67
RNF139Q8WU17 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC25.49■■□□□ 1.67
RNF139Q8WU17 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC25.49■■□□□ 1.67
RNF139Q8WU17 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
RNF139Q8WU17 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
RNF139Q8WU17 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC25.49■■□□□ 1.67
RNF139Q8WU17 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
RNF139Q8WU17 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
RNF139Q8WU17 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC25.48■■□□□ 1.67
RNF139Q8WU17 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC25.48■■□□□ 1.67
RNF139Q8WU17 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC25.48■■□□□ 1.67
RNF139Q8WU17 RAP2CP1-202ENST00000605179 643 ntBASIC25.48■■□□□ 1.67
RNF139Q8WU17 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC25.48■■□□□ 1.67
RNF139Q8WU17 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC25.48■■□□□ 1.67
RNF139Q8WU17 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC25.48■■□□□ 1.67
RNF139Q8WU17 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC25.48■■□□□ 1.67
RNF139Q8WU17 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
RNF139Q8WU17 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
RNF139Q8WU17 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC25.47■■□□□ 1.67
RNF139Q8WU17 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC25.47■■□□□ 1.67
RNF139Q8WU17 AL592293.1-201ENST00000502889 1188 ntBASIC25.47■■□□□ 1.67
RNF139Q8WU17 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC25.47■■□□□ 1.67
RNF139Q8WU17 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
RNF139Q8WU17 KRT18P60-201ENST00000312876 1297 ntBASIC25.46■■□□□ 1.67
RNF139Q8WU17 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC25.46■■□□□ 1.67
RNF139Q8WU17 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
RNF139Q8WU17 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC25.46■■□□□ 1.67
RNF139Q8WU17 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.67
RNF139Q8WU17 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
RNF139Q8WU17 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
RNF139Q8WU17 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC25.45■■□□□ 1.66
RNF139Q8WU17 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC25.45■■□□□ 1.66
RNF139Q8WU17 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC25.45■■□□□ 1.66
RNF139Q8WU17 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
RNF139Q8WU17 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
RNF139Q8WU17 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC25.44■■□□□ 1.66
RNF139Q8WU17 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC25.44■■□□□ 1.66
RNF139Q8WU17 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
RNF139Q8WU17 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC25.44■■□□□ 1.66
RNF139Q8WU17 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC25.43■■□□□ 1.66
RNF139Q8WU17 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
RNF139Q8WU17 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC25.43■■□□□ 1.66
RNF139Q8WU17 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
RNF139Q8WU17 AC012354.3-201ENST00000623734 483 ntBASIC25.43■■□□□ 1.66
RNF139Q8WU17 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC25.43■■□□□ 1.66
RNF139Q8WU17 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC25.43■■□□□ 1.66
RNF139Q8WU17 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
RNF139Q8WU17 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC25.42■■□□□ 1.66
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms