Protein–RNA interactions for Protein: Q8TAD8

SNIP1, Smad nuclear-interacting protein 1, humanhuman

Known RBP Predictions only

Length 396 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1Q8TAD8 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC23.18■■□□□ 1.3
SNIP1Q8TAD8 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC23.18■■□□□ 1.3
SNIP1Q8TAD8 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
SNIP1Q8TAD8 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
SNIP1Q8TAD8 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC23.17■■□□□ 1.3
SNIP1Q8TAD8 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC23.17■■□□□ 1.3
SNIP1Q8TAD8 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC23.17■■□□□ 1.3
SNIP1Q8TAD8 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
SNIP1Q8TAD8 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC23.17■■□□□ 1.3
SNIP1Q8TAD8 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
SNIP1Q8TAD8 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC23.16■■□□□ 1.3
SNIP1Q8TAD8 LONRF2P2-201ENST00000439212 571 ntBASIC23.16■■□□□ 1.3
SNIP1Q8TAD8 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
SNIP1Q8TAD8 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC23.16■■□□□ 1.3
SNIP1Q8TAD8 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC23.15■■□□□ 1.3
SNIP1Q8TAD8 MIR4787-201ENST00000607364 84 ntBASIC23.15■■□□□ 1.3
SNIP1Q8TAD8 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
SNIP1Q8TAD8 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
SNIP1Q8TAD8 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
SNIP1Q8TAD8 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
SNIP1Q8TAD8 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC23.14■■□□□ 1.29
SNIP1Q8TAD8 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC23.14■■□□□ 1.29
SNIP1Q8TAD8 BX664725.1-201ENST00000438252 379 ntBASIC23.14■■□□□ 1.29
SNIP1Q8TAD8 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC23.14■■□□□ 1.29
SNIP1Q8TAD8 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
SNIP1Q8TAD8 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
SNIP1Q8TAD8 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC23.13■■□□□ 1.29
SNIP1Q8TAD8 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC23.13■■□□□ 1.29
SNIP1Q8TAD8 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC23.13■■□□□ 1.29
SNIP1Q8TAD8 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC23.13■■□□□ 1.29
SNIP1Q8TAD8 AL359504.2-201ENST00000605506 1601 ntBASIC23.12■■□□□ 1.29
SNIP1Q8TAD8 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
SNIP1Q8TAD8 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC23.12■■□□□ 1.29
SNIP1Q8TAD8 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC23.12■■□□□ 1.29
SNIP1Q8TAD8 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC23.12■■□□□ 1.29
SNIP1Q8TAD8 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC23.11■■□□□ 1.29
SNIP1Q8TAD8 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC23.11■■□□□ 1.29
SNIP1Q8TAD8 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC23.11■■□□□ 1.29
SNIP1Q8TAD8 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
SNIP1Q8TAD8 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
SNIP1Q8TAD8 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
SNIP1Q8TAD8 KRT16P3-201ENST00000439127 1283 ntBASIC23.11■■□□□ 1.29
SNIP1Q8TAD8 RPS2P7-201ENST00000447334 885 ntBASIC23.11■■□□□ 1.29
SNIP1Q8TAD8 UNC93B8-201ENST00000511903 705 ntBASIC23.11■■□□□ 1.29
SNIP1Q8TAD8 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
SNIP1Q8TAD8 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
SNIP1Q8TAD8 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC23.1■■□□□ 1.29
SNIP1Q8TAD8 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC23.1■■□□□ 1.29
SNIP1Q8TAD8 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
SNIP1Q8TAD8 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
SNIP1Q8TAD8 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
SNIP1Q8TAD8 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
SNIP1Q8TAD8 AL139246.5-201ENST00000606645 996 ntBASIC23.1■■□□□ 1.29
SNIP1Q8TAD8 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
SNIP1Q8TAD8 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
SNIP1Q8TAD8 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC23.09■■□□□ 1.29
SNIP1Q8TAD8 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
SNIP1Q8TAD8 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
SNIP1Q8TAD8 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC23.09■■□□□ 1.29
SNIP1Q8TAD8 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
SNIP1Q8TAD8 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC23.08■■□□□ 1.29
SNIP1Q8TAD8 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
SNIP1Q8TAD8 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
SNIP1Q8TAD8 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC23.08■■□□□ 1.28
SNIP1Q8TAD8 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC23.07■■□□□ 1.28
SNIP1Q8TAD8 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC23.07■■□□□ 1.28
SNIP1Q8TAD8 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC23.07■■□□□ 1.28
SNIP1Q8TAD8 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
SNIP1Q8TAD8 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
SNIP1Q8TAD8 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC23.06■■□□□ 1.28
SNIP1Q8TAD8 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC23.06■■□□□ 1.28
SNIP1Q8TAD8 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
SNIP1Q8TAD8 AC022616.5-201ENST00000518796 181 ntBASIC23.05■■□□□ 1.28
SNIP1Q8TAD8 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC23.05■■□□□ 1.28
SNIP1Q8TAD8 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC23.05■■□□□ 1.28
SNIP1Q8TAD8 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
SNIP1Q8TAD8 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC23.04■■□□□ 1.28
SNIP1Q8TAD8 RALB-208ENST00000631312 311 ntTSL 5 BASIC23.04■■□□□ 1.28
SNIP1Q8TAD8 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC23.03■■□□□ 1.28
SNIP1Q8TAD8 ST7-AS1-201ENST00000456775 1889 ntBASIC23.03■■□□□ 1.28
SNIP1Q8TAD8 NALT1-201ENST00000429224 738 ntTSL 5 BASIC23.03■■□□□ 1.28
SNIP1Q8TAD8 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC23.03■■□□□ 1.28
SNIP1Q8TAD8 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
SNIP1Q8TAD8 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
SNIP1Q8TAD8 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC23.02■■□□□ 1.28
SNIP1Q8TAD8 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
SNIP1Q8TAD8 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC23.02■■□□□ 1.28
SNIP1Q8TAD8 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
SNIP1Q8TAD8 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
SNIP1Q8TAD8 AP002414.2-202ENST00000590929 1450 ntBASIC23.01■■□□□ 1.27
SNIP1Q8TAD8 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
SNIP1Q8TAD8 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC23.01■■□□□ 1.27
SNIP1Q8TAD8 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC23.01■■□□□ 1.27
SNIP1Q8TAD8 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC23.01■■□□□ 1.27
SNIP1Q8TAD8 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC23.01■■□□□ 1.27
SNIP1Q8TAD8 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
SNIP1Q8TAD8 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC23.01■■□□□ 1.27
SNIP1Q8TAD8 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC23.01■■□□□ 1.27
SNIP1Q8TAD8 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
SNIP1Q8TAD8 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 14.9 ms