Protein–RNA interactions for Protein: Q8NE35

CPEB3, Cytoplasmic polyadenylation element-binding protein 3, humanhuman

Known RBP Predictions only

Length 698 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB3Q8NE35 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC21.3■■□□□ 1
CPEB3Q8NE35 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CPEB3Q8NE35 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC21.3■■□□□ 1
CPEB3Q8NE35 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
CPEB3Q8NE35 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC21.29■■□□□ 1
CPEB3Q8NE35 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC21.29■■□□□ 1
CPEB3Q8NE35 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC21.29■■□□□ 1
CPEB3Q8NE35 AC025884.2-201ENST00000553429 711 ntBASIC21.29■■□□□ 1
CPEB3Q8NE35 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC21.29■■□□□ 1
CPEB3Q8NE35 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CPEB3Q8NE35 SMPD5-203ENST00000639008 1464 ntBASIC21.28■■□□□ 1
CPEB3Q8NE35 HES4-202ENST00000428771 1040 ntTSL 2 BASIC21.28■■□□□ 1
CPEB3Q8NE35 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC21.28■■□□□ 1
CPEB3Q8NE35 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CPEB3Q8NE35 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC21.28■■□□□ 1
CPEB3Q8NE35 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC21.28■■□□□ 1
CPEB3Q8NE35 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC21.28■■□□□ 1
CPEB3Q8NE35 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
CPEB3Q8NE35 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
CPEB3Q8NE35 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC21.27■■□□□ 1
CPEB3Q8NE35 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
CPEB3Q8NE35 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC21.27■□□□□ 0.99
CPEB3Q8NE35 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
CPEB3Q8NE35 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CPEB3Q8NE35 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC21.26■□□□□ 0.99
CPEB3Q8NE35 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
CPEB3Q8NE35 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CPEB3Q8NE35 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CPEB3Q8NE35 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC21.25■□□□□ 0.99
CPEB3Q8NE35 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CPEB3Q8NE35 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CPEB3Q8NE35 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC21.25■□□□□ 0.99
CPEB3Q8NE35 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC21.25■□□□□ 0.99
CPEB3Q8NE35 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CPEB3Q8NE35 HSD17B1P1-201ENST00000590052 955 ntBASIC21.25■□□□□ 0.99
CPEB3Q8NE35 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CPEB3Q8NE35 RNF126P1-201ENST00000567452 1320 ntBASIC21.25■□□□□ 0.99
CPEB3Q8NE35 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CPEB3Q8NE35 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
CPEB3Q8NE35 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CPEB3Q8NE35 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
CPEB3Q8NE35 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC21.24■□□□□ 0.99
CPEB3Q8NE35 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
CPEB3Q8NE35 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CPEB3Q8NE35 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC21.23■□□□□ 0.99
CPEB3Q8NE35 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC21.23■□□□□ 0.99
CPEB3Q8NE35 PFN2-211ENST00000489155 636 ntTSL 4 BASIC21.23■□□□□ 0.99
CPEB3Q8NE35 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CPEB3Q8NE35 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
CPEB3Q8NE35 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CPEB3Q8NE35 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC21.22■□□□□ 0.99
CPEB3Q8NE35 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CPEB3Q8NE35 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CPEB3Q8NE35 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC21.22■□□□□ 0.99
CPEB3Q8NE35 REST-210ENST00000638187 1334 ntTSL 5 BASIC21.22■□□□□ 0.99
CPEB3Q8NE35 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CPEB3Q8NE35 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC21.21■□□□□ 0.99
CPEB3Q8NE35 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC21.21■□□□□ 0.99
CPEB3Q8NE35 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC21.21■□□□□ 0.99
CPEB3Q8NE35 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC21.21■□□□□ 0.99
CPEB3Q8NE35 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CPEB3Q8NE35 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CPEB3Q8NE35 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC21.2■□□□□ 0.98
CPEB3Q8NE35 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CPEB3Q8NE35 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC21.2■□□□□ 0.98
CPEB3Q8NE35 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
CPEB3Q8NE35 AC091060.1-201ENST00000623524 1766 ntBASIC21.2■□□□□ 0.98
CPEB3Q8NE35 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CPEB3Q8NE35 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CPEB3Q8NE35 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CPEB3Q8NE35 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
CPEB3Q8NE35 MIR3960-201ENST00000583311 91 ntBASIC21.19■□□□□ 0.98
CPEB3Q8NE35 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC21.19■□□□□ 0.98
CPEB3Q8NE35 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC21.19■□□□□ 0.98
CPEB3Q8NE35 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
CPEB3Q8NE35 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
CPEB3Q8NE35 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CPEB3Q8NE35 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CPEB3Q8NE35 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC21.18■□□□□ 0.98
CPEB3Q8NE35 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CPEB3Q8NE35 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CPEB3Q8NE35 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CPEB3Q8NE35 AC092803.2-201ENST00000564287 1899 ntBASIC21.18■□□□□ 0.98
CPEB3Q8NE35 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC21.17■□□□□ 0.98
CPEB3Q8NE35 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CPEB3Q8NE35 AC007029.1-201ENST00000604183 313 ntBASIC21.17■□□□□ 0.98
CPEB3Q8NE35 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CPEB3Q8NE35 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
CPEB3Q8NE35 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CPEB3Q8NE35 CREM-210ENST00000374721 2020 ntTSL 5 BASIC21.16■□□□□ 0.98
CPEB3Q8NE35 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CPEB3Q8NE35 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC21.16■□□□□ 0.98
CPEB3Q8NE35 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC21.16■□□□□ 0.98
CPEB3Q8NE35 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC21.15■□□□□ 0.98
CPEB3Q8NE35 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CPEB3Q8NE35 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CPEB3Q8NE35 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CPEB3Q8NE35 RARRES2P2-201ENST00000394842 485 ntBASIC21.15■□□□□ 0.98
CPEB3Q8NE35 RP9P-202ENST00000450133 1212 ntBASIC21.15■□□□□ 0.98
CPEB3Q8NE35 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 66.5 ms