Protein–RNA interactions for Protein: Q8NDP4

ZNF439, Zinc finger protein 439, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF439Q8NDP4 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC20.06■□□□□ 0.8
ZNF439Q8NDP4 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC20.06■□□□□ 0.8
ZNF439Q8NDP4 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC20.06■□□□□ 0.8
ZNF439Q8NDP4 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
ZNF439Q8NDP4 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ZNF439Q8NDP4 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
ZNF439Q8NDP4 MIR639-201ENST00000384974 98 ntBASIC20.06■□□□□ 0.8
ZNF439Q8NDP4 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC20.06■□□□□ 0.8
ZNF439Q8NDP4 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ZNF439Q8NDP4 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC20.06■□□□□ 0.8
ZNF439Q8NDP4 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC20.05■□□□□ 0.8
ZNF439Q8NDP4 AC092803.2-201ENST00000564287 1899 ntBASIC20.05■□□□□ 0.8
ZNF439Q8NDP4 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ZNF439Q8NDP4 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
ZNF439Q8NDP4 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC20.05■□□□□ 0.8
ZNF439Q8NDP4 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
ZNF439Q8NDP4 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ZNF439Q8NDP4 AC145676.1-201ENST00000514988 2004 ntBASIC20.05■□□□□ 0.8
ZNF439Q8NDP4 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
ZNF439Q8NDP4 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
ZNF439Q8NDP4 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
ZNF439Q8NDP4 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ZNF439Q8NDP4 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
ZNF439Q8NDP4 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ZNF439Q8NDP4 RPS2-202ENST00000526522 924 ntTSL 2 BASIC20.04■□□□□ 0.8
ZNF439Q8NDP4 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC20.04■□□□□ 0.8
ZNF439Q8NDP4 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
ZNF439Q8NDP4 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC20.03■□□□□ 0.8
ZNF439Q8NDP4 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
ZNF439Q8NDP4 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
ZNF439Q8NDP4 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
ZNF439Q8NDP4 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ZNF439Q8NDP4 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
ZNF439Q8NDP4 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
ZNF439Q8NDP4 AC126177.7-201ENST00000547904 679 ntBASIC20.03■□□□□ 0.8
ZNF439Q8NDP4 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
ZNF439Q8NDP4 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
ZNF439Q8NDP4 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
ZNF439Q8NDP4 AL359504.2-201ENST00000605506 1601 ntBASIC20.02■□□□□ 0.8
ZNF439Q8NDP4 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC20.02■□□□□ 0.8
ZNF439Q8NDP4 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
ZNF439Q8NDP4 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
ZNF439Q8NDP4 DUSP8P4-201ENST00000399538 1761 ntBASIC20.01■□□□□ 0.79
ZNF439Q8NDP4 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
ZNF439Q8NDP4 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC20.01■□□□□ 0.79
ZNF439Q8NDP4 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC20.01■□□□□ 0.79
ZNF439Q8NDP4 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC20.01■□□□□ 0.79
ZNF439Q8NDP4 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
ZNF439Q8NDP4 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
ZNF439Q8NDP4 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC20■□□□□ 0.79
ZNF439Q8NDP4 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
ZNF439Q8NDP4 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC20■□□□□ 0.79
ZNF439Q8NDP4 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
ZNF439Q8NDP4 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
ZNF439Q8NDP4 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC19.99■□□□□ 0.79
ZNF439Q8NDP4 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC19.99■□□□□ 0.79
ZNF439Q8NDP4 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
ZNF439Q8NDP4 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
ZNF439Q8NDP4 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
ZNF439Q8NDP4 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
ZNF439Q8NDP4 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
ZNF439Q8NDP4 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
ZNF439Q8NDP4 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
ZNF439Q8NDP4 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
ZNF439Q8NDP4 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
ZNF439Q8NDP4 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
ZNF439Q8NDP4 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
ZNF439Q8NDP4 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
ZNF439Q8NDP4 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC19.99■□□□□ 0.79
ZNF439Q8NDP4 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
ZNF439Q8NDP4 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC19.98■□□□□ 0.79
ZNF439Q8NDP4 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
ZNF439Q8NDP4 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
ZNF439Q8NDP4 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC19.98■□□□□ 0.79
ZNF439Q8NDP4 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC19.98■□□□□ 0.79
ZNF439Q8NDP4 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC19.98■□□□□ 0.79
ZNF439Q8NDP4 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC19.97■□□□□ 0.79
ZNF439Q8NDP4 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
ZNF439Q8NDP4 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
ZNF439Q8NDP4 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC19.96■□□□□ 0.79
ZNF439Q8NDP4 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
ZNF439Q8NDP4 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
ZNF439Q8NDP4 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
ZNF439Q8NDP4 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC19.96■□□□□ 0.79
ZNF439Q8NDP4 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
ZNF439Q8NDP4 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC19.96■□□□□ 0.79
ZNF439Q8NDP4 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
ZNF439Q8NDP4 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
ZNF439Q8NDP4 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
ZNF439Q8NDP4 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
ZNF439Q8NDP4 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
ZNF439Q8NDP4 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
ZNF439Q8NDP4 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
ZNF439Q8NDP4 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC19.94■□□□□ 0.78
ZNF439Q8NDP4 AC060814.1-201ENST00000554326 538 ntBASIC19.94■□□□□ 0.78
ZNF439Q8NDP4 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC19.94■□□□□ 0.78
ZNF439Q8NDP4 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC19.94■□□□□ 0.78
ZNF439Q8NDP4 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
ZNF439Q8NDP4 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC19.94■□□□□ 0.78
ZNF439Q8NDP4 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms