Protein–RNA interactions for Protein: Q8N587

ZNF561, Zinc finger protein 561, humanhuman

Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF561Q8N587 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
ZNF561Q8N587 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC20.58■□□□□ 0.89
ZNF561Q8N587 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC20.58■□□□□ 0.88
ZNF561Q8N587 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
ZNF561Q8N587 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
ZNF561Q8N587 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
ZNF561Q8N587 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
ZNF561Q8N587 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC20.57■□□□□ 0.88
ZNF561Q8N587 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
ZNF561Q8N587 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
ZNF561Q8N587 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
ZNF561Q8N587 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
ZNF561Q8N587 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
ZNF561Q8N587 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC20.56■□□□□ 0.88
ZNF561Q8N587 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ZNF561Q8N587 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
ZNF561Q8N587 SRP68-213ENST00000629930 165 ntTSL 5 BASIC20.56■□□□□ 0.88
ZNF561Q8N587 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC20.56■□□□□ 0.88
ZNF561Q8N587 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
ZNF561Q8N587 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ZNF561Q8N587 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ZNF561Q8N587 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC20.55■□□□□ 0.88
ZNF561Q8N587 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ZNF561Q8N587 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ZNF561Q8N587 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
ZNF561Q8N587 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
ZNF561Q8N587 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
ZNF561Q8N587 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
ZNF561Q8N587 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
ZNF561Q8N587 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
ZNF561Q8N587 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC20.54■□□□□ 0.88
ZNF561Q8N587 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
ZNF561Q8N587 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ZNF561Q8N587 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
ZNF561Q8N587 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
ZNF561Q8N587 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC20.54■□□□□ 0.88
ZNF561Q8N587 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
ZNF561Q8N587 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
ZNF561Q8N587 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
ZNF561Q8N587 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
ZNF561Q8N587 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
ZNF561Q8N587 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC20.52■□□□□ 0.88
ZNF561Q8N587 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
ZNF561Q8N587 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC20.52■□□□□ 0.88
ZNF561Q8N587 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.87
ZNF561Q8N587 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
ZNF561Q8N587 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC20.51■□□□□ 0.87
ZNF561Q8N587 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
ZNF561Q8N587 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
ZNF561Q8N587 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
ZNF561Q8N587 AC060814.1-201ENST00000554326 538 ntBASIC20.51■□□□□ 0.87
ZNF561Q8N587 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC20.51■□□□□ 0.87
ZNF561Q8N587 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
ZNF561Q8N587 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC20.5■□□□□ 0.87
ZNF561Q8N587 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
ZNF561Q8N587 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
ZNF561Q8N587 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
ZNF561Q8N587 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
ZNF561Q8N587 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
ZNF561Q8N587 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
ZNF561Q8N587 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC20.49■□□□□ 0.87
ZNF561Q8N587 AC022413.1-201ENST00000624602 984 ntBASIC20.49■□□□□ 0.87
ZNF561Q8N587 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
ZNF561Q8N587 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC20.49■□□□□ 0.87
ZNF561Q8N587 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
ZNF561Q8N587 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC20.48■□□□□ 0.87
ZNF561Q8N587 CEP120-209ENST00000515110 606 ntTSL 3 BASIC20.48■□□□□ 0.87
ZNF561Q8N587 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
ZNF561Q8N587 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
ZNF561Q8N587 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC20.48■□□□□ 0.87
ZNF561Q8N587 AL359504.2-201ENST00000605506 1601 ntBASIC20.48■□□□□ 0.87
ZNF561Q8N587 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC20.48■□□□□ 0.87
ZNF561Q8N587 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
ZNF561Q8N587 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
ZNF561Q8N587 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
ZNF561Q8N587 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC20.48■□□□□ 0.87
ZNF561Q8N587 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
ZNF561Q8N587 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
ZNF561Q8N587 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC20.47■□□□□ 0.87
ZNF561Q8N587 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
ZNF561Q8N587 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
ZNF561Q8N587 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
ZNF561Q8N587 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
ZNF561Q8N587 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
ZNF561Q8N587 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC20.47■□□□□ 0.87
ZNF561Q8N587 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC20.47■□□□□ 0.87
ZNF561Q8N587 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC20.47■□□□□ 0.87
ZNF561Q8N587 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
ZNF561Q8N587 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
ZNF561Q8N587 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC20.46■□□□□ 0.87
ZNF561Q8N587 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
ZNF561Q8N587 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
ZNF561Q8N587 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
ZNF561Q8N587 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
ZNF561Q8N587 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
ZNF561Q8N587 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
ZNF561Q8N587 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
ZNF561Q8N587 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
ZNF561Q8N587 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC20.44■□□□□ 0.86
ZNF561Q8N587 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 13.3 ms