Protein–RNA interactions for Protein: Q8IWY4

SCUBE1, Signal peptide, CUB and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE1Q8IWY4 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
SCUBE1Q8IWY4 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
SCUBE1Q8IWY4 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC23.9■■□□□ 1.42
SCUBE1Q8IWY4 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
SCUBE1Q8IWY4 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
SCUBE1Q8IWY4 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC23.9■■□□□ 1.42
SCUBE1Q8IWY4 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC23.9■■□□□ 1.42
SCUBE1Q8IWY4 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC23.9■■□□□ 1.42
SCUBE1Q8IWY4 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
SCUBE1Q8IWY4 CHST11-202ENST00000546689 756 ntTSL 2 BASIC23.89■■□□□ 1.41
SCUBE1Q8IWY4 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
SCUBE1Q8IWY4 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
SCUBE1Q8IWY4 RPS2-202ENST00000526522 924 ntTSL 2 BASIC23.88■■□□□ 1.41
SCUBE1Q8IWY4 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC23.88■■□□□ 1.41
SCUBE1Q8IWY4 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
SCUBE1Q8IWY4 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC23.88■■□□□ 1.41
SCUBE1Q8IWY4 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
SCUBE1Q8IWY4 ERN1-208ENST00000606895 2068 ntBASIC23.87■■□□□ 1.41
SCUBE1Q8IWY4 PEX7-203ENST00000541292 945 ntTSL 5 BASIC23.87■■□□□ 1.41
SCUBE1Q8IWY4 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
SCUBE1Q8IWY4 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC23.86■■□□□ 1.41
SCUBE1Q8IWY4 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC23.86■■□□□ 1.41
SCUBE1Q8IWY4 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
SCUBE1Q8IWY4 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
SCUBE1Q8IWY4 MIR639-201ENST00000384974 98 ntBASIC23.86■■□□□ 1.41
SCUBE1Q8IWY4 HLA-V-202ENST00000446817 847 ntBASIC23.86■■□□□ 1.41
SCUBE1Q8IWY4 MBP-237ENST00000579129 1052 ntTSL 5 BASIC23.86■■□□□ 1.41
SCUBE1Q8IWY4 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC23.86■■□□□ 1.41
SCUBE1Q8IWY4 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC23.86■■□□□ 1.41
SCUBE1Q8IWY4 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC23.86■■□□□ 1.41
SCUBE1Q8IWY4 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
SCUBE1Q8IWY4 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
SCUBE1Q8IWY4 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
SCUBE1Q8IWY4 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC23.85■■□□□ 1.41
SCUBE1Q8IWY4 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
SCUBE1Q8IWY4 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC23.85■■□□□ 1.41
SCUBE1Q8IWY4 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC23.85■■□□□ 1.41
SCUBE1Q8IWY4 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC23.84■■□□□ 1.41
SCUBE1Q8IWY4 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC23.84■■□□□ 1.41
SCUBE1Q8IWY4 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC23.84■■□□□ 1.41
SCUBE1Q8IWY4 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC23.83■■□□□ 1.41
SCUBE1Q8IWY4 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC23.83■■□□□ 1.41
SCUBE1Q8IWY4 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
SCUBE1Q8IWY4 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC23.83■■□□□ 1.41
SCUBE1Q8IWY4 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
SCUBE1Q8IWY4 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.4
SCUBE1Q8IWY4 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC23.83■■□□□ 1.4
SCUBE1Q8IWY4 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC23.82■■□□□ 1.4
SCUBE1Q8IWY4 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC23.82■■□□□ 1.4
SCUBE1Q8IWY4 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC23.82■■□□□ 1.4
SCUBE1Q8IWY4 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
SCUBE1Q8IWY4 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
SCUBE1Q8IWY4 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
SCUBE1Q8IWY4 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
SCUBE1Q8IWY4 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
SCUBE1Q8IWY4 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
SCUBE1Q8IWY4 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
SCUBE1Q8IWY4 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
SCUBE1Q8IWY4 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
SCUBE1Q8IWY4 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
SCUBE1Q8IWY4 RPS2-210ENST00000530225 765 ntTSL 2 BASIC23.8■■□□□ 1.4
SCUBE1Q8IWY4 METRNL-202ENST00000570778 967 ntTSL 5 BASIC23.8■■□□□ 1.4
SCUBE1Q8IWY4 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
SCUBE1Q8IWY4 AP004609.3-201ENST00000610705 1884 ntBASIC23.79■■□□□ 1.4
SCUBE1Q8IWY4 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC23.79■■□□□ 1.4
SCUBE1Q8IWY4 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC23.79■■□□□ 1.4
SCUBE1Q8IWY4 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC23.79■■□□□ 1.4
SCUBE1Q8IWY4 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
SCUBE1Q8IWY4 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC23.79■■□□□ 1.4
SCUBE1Q8IWY4 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
SCUBE1Q8IWY4 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
SCUBE1Q8IWY4 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC23.78■■□□□ 1.4
SCUBE1Q8IWY4 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
SCUBE1Q8IWY4 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
SCUBE1Q8IWY4 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC23.78■■□□□ 1.4
SCUBE1Q8IWY4 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC23.78■■□□□ 1.4
SCUBE1Q8IWY4 AC008813.1-201ENST00000536597 885 ntBASIC23.78■■□□□ 1.4
SCUBE1Q8IWY4 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
SCUBE1Q8IWY4 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
SCUBE1Q8IWY4 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
SCUBE1Q8IWY4 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
SCUBE1Q8IWY4 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
SCUBE1Q8IWY4 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
SCUBE1Q8IWY4 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC23.76■■□□□ 1.39
SCUBE1Q8IWY4 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC23.76■■□□□ 1.39
SCUBE1Q8IWY4 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
SCUBE1Q8IWY4 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
SCUBE1Q8IWY4 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
SCUBE1Q8IWY4 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
SCUBE1Q8IWY4 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC23.75■■□□□ 1.39
SCUBE1Q8IWY4 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC23.75■■□□□ 1.39
SCUBE1Q8IWY4 MIR4449-201ENST00000578365 66 ntBASIC23.74■■□□□ 1.39
SCUBE1Q8IWY4 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
SCUBE1Q8IWY4 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC23.74■■□□□ 1.39
SCUBE1Q8IWY4 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC23.74■■□□□ 1.39
SCUBE1Q8IWY4 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
SCUBE1Q8IWY4 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC23.73■■□□□ 1.39
SCUBE1Q8IWY4 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC23.73■■□□□ 1.39
SCUBE1Q8IWY4 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
SCUBE1Q8IWY4 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 17.1 ms