Protein–RNA interactions for Protein: Q8IWV7

UBR1, E3 ubiquitin-protein ligase UBR1, humanhuman

Predictions only

Length 1,749 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1Q8IWV7 ABCB10P3-201ENST00000561950 2166 ntBASIC35.58■■■■□ 3.29
UBR1Q8IWV7 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC35.57■■■■□ 3.29
UBR1Q8IWV7 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC35.57■■■■□ 3.28
UBR1Q8IWV7 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC35.57■■■■□ 3.28
UBR1Q8IWV7 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC35.57■■■■□ 3.28
UBR1Q8IWV7 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC35.57■■■■□ 3.28
UBR1Q8IWV7 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC35.56■■■■□ 3.28
UBR1Q8IWV7 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC35.56■■■■□ 3.28
UBR1Q8IWV7 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC35.56■■■■□ 3.28
UBR1Q8IWV7 RPS2P7-201ENST00000447334 885 ntBASIC35.55■■■■□ 3.28
UBR1Q8IWV7 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC35.55■■■■□ 3.28
UBR1Q8IWV7 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC35.55■■■■□ 3.28
UBR1Q8IWV7 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC35.55■■■■□ 3.28
UBR1Q8IWV7 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC35.55■■■■□ 3.28
UBR1Q8IWV7 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC35.55■■■■□ 3.28
UBR1Q8IWV7 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC35.55■■■■□ 3.28
UBR1Q8IWV7 KRT16P3-201ENST00000439127 1283 ntBASIC35.54■■■■□ 3.28
UBR1Q8IWV7 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC35.54■■■■□ 3.28
UBR1Q8IWV7 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC35.54■■■■□ 3.28
UBR1Q8IWV7 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC35.54■■■■□ 3.28
UBR1Q8IWV7 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC35.54■■■■□ 3.28
UBR1Q8IWV7 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC35.53■■■■□ 3.28
UBR1Q8IWV7 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC35.53■■■■□ 3.28
UBR1Q8IWV7 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC35.52■■■■□ 3.28
UBR1Q8IWV7 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC35.52■■■■□ 3.28
UBR1Q8IWV7 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC35.52■■■■□ 3.28
UBR1Q8IWV7 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC35.52■■■■□ 3.28
UBR1Q8IWV7 MIR4787-201ENST00000607364 84 ntBASIC35.51■■■■□ 3.27
UBR1Q8IWV7 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC35.51■■■■□ 3.27
UBR1Q8IWV7 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC35.5■■■■□ 3.27
UBR1Q8IWV7 WHAMMP3-201ENST00000611636 1609 ntBASIC35.5■■■■□ 3.27
UBR1Q8IWV7 PEMT-206ENST00000435340 960 ntTSL 5 BASIC35.5■■■■□ 3.27
UBR1Q8IWV7 BX664725.1-201ENST00000438252 379 ntBASIC35.5■■■■□ 3.27
UBR1Q8IWV7 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC35.5■■■■□ 3.27
UBR1Q8IWV7 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC35.5■■■■□ 3.27
UBR1Q8IWV7 LONRF2P2-201ENST00000439212 571 ntBASIC35.49■■■■□ 3.27
UBR1Q8IWV7 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC35.49■■■■□ 3.27
UBR1Q8IWV7 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC35.48■■■■□ 3.27
UBR1Q8IWV7 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC35.48■■■■□ 3.27
UBR1Q8IWV7 AC131281.2-201ENST00000520478 145 ntBASIC35.47■■■■□ 3.27
UBR1Q8IWV7 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC35.47■■■■□ 3.27
UBR1Q8IWV7 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC35.46■■■■□ 3.27
UBR1Q8IWV7 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC35.46■■■■□ 3.27
UBR1Q8IWV7 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC35.46■■■■□ 3.27
UBR1Q8IWV7 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC35.46■■■■□ 3.27
UBR1Q8IWV7 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC35.46■■■■□ 3.27
UBR1Q8IWV7 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC35.46■■■■□ 3.27
UBR1Q8IWV7 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC35.46■■■■□ 3.27
UBR1Q8IWV7 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC35.45■■■■□ 3.27
UBR1Q8IWV7 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC35.44■■■■□ 3.26
UBR1Q8IWV7 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC35.43■■■■□ 3.26
UBR1Q8IWV7 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC35.43■■■■□ 3.26
UBR1Q8IWV7 KRT125P-201ENST00000546827 989 ntBASIC35.43■■■■□ 3.26
UBR1Q8IWV7 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC35.42■■■■□ 3.26
UBR1Q8IWV7 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC35.42■■■■□ 3.26
UBR1Q8IWV7 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC35.42■■■■□ 3.26
UBR1Q8IWV7 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC35.42■■■■□ 3.26
UBR1Q8IWV7 AL139393.2-201ENST00000608721 2025 ntBASIC35.42■■■■□ 3.26
UBR1Q8IWV7 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC35.41■■■■□ 3.26
UBR1Q8IWV7 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC35.41■■■■□ 3.26
UBR1Q8IWV7 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC35.41■■■■□ 3.26
UBR1Q8IWV7 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC35.41■■■■□ 3.26
UBR1Q8IWV7 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC35.41■■■■□ 3.26
UBR1Q8IWV7 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC35.41■■■■□ 3.26
UBR1Q8IWV7 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC35.41■■■■□ 3.26
UBR1Q8IWV7 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC35.41■■■■□ 3.26
UBR1Q8IWV7 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC35.4■■■■□ 3.26
UBR1Q8IWV7 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC35.4■■■■□ 3.26
UBR1Q8IWV7 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC35.4■■■■□ 3.26
UBR1Q8IWV7 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC35.4■■■■□ 3.26
UBR1Q8IWV7 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC35.39■■■■□ 3.26
UBR1Q8IWV7 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC35.39■■■■□ 3.26
UBR1Q8IWV7 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC35.39■■■■□ 3.26
UBR1Q8IWV7 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC35.39■■■■□ 3.26
UBR1Q8IWV7 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC35.39■■■■□ 3.26
UBR1Q8IWV7 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC35.39■■■■□ 3.26
UBR1Q8IWV7 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC35.39■■■■□ 3.26
UBR1Q8IWV7 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC35.38■■■■□ 3.25
UBR1Q8IWV7 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC35.38■■■■□ 3.25
UBR1Q8IWV7 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC35.38■■■■□ 3.25
UBR1Q8IWV7 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC35.38■■■■□ 3.25
UBR1Q8IWV7 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC35.38■■■■□ 3.25
UBR1Q8IWV7 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC35.37■■■■□ 3.25
UBR1Q8IWV7 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC35.37■■■■□ 3.25
UBR1Q8IWV7 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC35.37■■■■□ 3.25
UBR1Q8IWV7 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC35.37■■■■□ 3.25
UBR1Q8IWV7 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC35.37■■■■□ 3.25
UBR1Q8IWV7 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC35.36■■■■□ 3.25
UBR1Q8IWV7 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC35.36■■■■□ 3.25
UBR1Q8IWV7 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC35.36■■■■□ 3.25
UBR1Q8IWV7 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC35.36■■■■□ 3.25
UBR1Q8IWV7 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC35.36■■■■□ 3.25
UBR1Q8IWV7 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC35.35■■■■□ 3.25
UBR1Q8IWV7 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC35.35■■■■□ 3.25
UBR1Q8IWV7 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC35.35■■■■□ 3.25
UBR1Q8IWV7 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC35.35■■■■□ 3.25
UBR1Q8IWV7 AC022616.5-201ENST00000518796 181 ntBASIC35.35■■■■□ 3.25
UBR1Q8IWV7 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC35.34■■■■□ 3.25
UBR1Q8IWV7 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC35.34■■■■□ 3.25
UBR1Q8IWV7 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC35.34■■■■□ 3.25
Retrieved 100 of 98,524 protein–RNA pairs in 300.1 ms