Protein–RNA interactions for Protein: Q7Z7G8

VPS13B, Vacuolar protein sorting-associated protein 13B, humanhuman

Predictions only

Length 4,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13BQ7Z7G8 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
VPS13BQ7Z7G8 AC018755.3-202ENST00000596210 929 ntBASIC15.31■□□□□ 0.04
VPS13BQ7Z7G8 AC139426.1-201ENST00000568218 2529 ntBASIC15.31■□□□□ 0.04
VPS13BQ7Z7G8 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
VPS13BQ7Z7G8 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC15.31■□□□□ 0.04
VPS13BQ7Z7G8 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC15.31■□□□□ 0.04
VPS13BQ7Z7G8 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC15.31■□□□□ 0.04
VPS13BQ7Z7G8 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
VPS13BQ7Z7G8 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC15.31■□□□□ 0.04
VPS13BQ7Z7G8 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
VPS13BQ7Z7G8 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
VPS13BQ7Z7G8 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
VPS13BQ7Z7G8 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC15.3■□□□□ 0.04
VPS13BQ7Z7G8 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
VPS13BQ7Z7G8 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
VPS13BQ7Z7G8 CREM-229ENST00000474362 1030 ntTSL 2 BASIC15.29■□□□□ 0.04
VPS13BQ7Z7G8 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC15.29■□□□□ 0.04
VPS13BQ7Z7G8 IDNK-203ENST00000405990 629 ntTSL 2 BASIC15.29■□□□□ 0.04
VPS13BQ7Z7G8 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
VPS13BQ7Z7G8 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC15.29■□□□□ 0.04
VPS13BQ7Z7G8 ST7-205ENST00000393446 2114 ntTSL 5 BASIC15.29■□□□□ 0.04
VPS13BQ7Z7G8 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC15.28■□□□□ 0.04
VPS13BQ7Z7G8 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
VPS13BQ7Z7G8 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
VPS13BQ7Z7G8 RNF146-205ENST00000477776 762 ntTSL 3 BASIC15.28■□□□□ 0.04
VPS13BQ7Z7G8 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC15.28■□□□□ 0.04
VPS13BQ7Z7G8 AP002414.2-202ENST00000590929 1450 ntBASIC15.28■□□□□ 0.04
VPS13BQ7Z7G8 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
VPS13BQ7Z7G8 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
VPS13BQ7Z7G8 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
VPS13BQ7Z7G8 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
VPS13BQ7Z7G8 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC15.27■□□□□ 0.03
VPS13BQ7Z7G8 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC15.26■□□□□ 0.03
VPS13BQ7Z7G8 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
VPS13BQ7Z7G8 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
VPS13BQ7Z7G8 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
VPS13BQ7Z7G8 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
VPS13BQ7Z7G8 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
VPS13BQ7Z7G8 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
VPS13BQ7Z7G8 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
VPS13BQ7Z7G8 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC15.25■□□□□ 0.03
VPS13BQ7Z7G8 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC15.25■□□□□ 0.03
VPS13BQ7Z7G8 UNC93B8-201ENST00000511903 705 ntBASIC15.25■□□□□ 0.03
VPS13BQ7Z7G8 RALB-208ENST00000631312 311 ntTSL 5 BASIC15.25■□□□□ 0.03
VPS13BQ7Z7G8 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
VPS13BQ7Z7G8 AC019171.1-201ENST00000601251 1056 ntBASIC15.25■□□□□ 0.03
VPS13BQ7Z7G8 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
VPS13BQ7Z7G8 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC15.25■□□□□ 0.03
VPS13BQ7Z7G8 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
VPS13BQ7Z7G8 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
VPS13BQ7Z7G8 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
VPS13BQ7Z7G8 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC15.24■□□□□ 0.03
VPS13BQ7Z7G8 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
VPS13BQ7Z7G8 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
VPS13BQ7Z7G8 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
VPS13BQ7Z7G8 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
VPS13BQ7Z7G8 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
VPS13BQ7Z7G8 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
VPS13BQ7Z7G8 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC15.24■□□□□ 0.03
VPS13BQ7Z7G8 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC15.24■□□□□ 0.03
VPS13BQ7Z7G8 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC15.24■□□□□ 0.03
VPS13BQ7Z7G8 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC15.24■□□□□ 0.03
VPS13BQ7Z7G8 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC15.24■□□□□ 0.03
VPS13BQ7Z7G8 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
VPS13BQ7Z7G8 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
VPS13BQ7Z7G8 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
VPS13BQ7Z7G8 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC15.24■□□□□ 0.03
VPS13BQ7Z7G8 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC15.23■□□□□ 0.03
VPS13BQ7Z7G8 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
VPS13BQ7Z7G8 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC15.23■□□□□ 0.03
VPS13BQ7Z7G8 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
VPS13BQ7Z7G8 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC15.23■□□□□ 0.03
VPS13BQ7Z7G8 MIR4787-201ENST00000607364 84 ntBASIC15.23■□□□□ 0.03
VPS13BQ7Z7G8 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC15.22■□□□□ 0.03
VPS13BQ7Z7G8 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
VPS13BQ7Z7G8 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
VPS13BQ7Z7G8 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
VPS13BQ7Z7G8 AL139246.5-201ENST00000606645 996 ntBASIC15.22■□□□□ 0.03
VPS13BQ7Z7G8 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
VPS13BQ7Z7G8 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
VPS13BQ7Z7G8 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC15.22■□□□□ 0.03
VPS13BQ7Z7G8 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC15.22■□□□□ 0.03
VPS13BQ7Z7G8 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC15.21■□□□□ 0.03
VPS13BQ7Z7G8 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
VPS13BQ7Z7G8 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
VPS13BQ7Z7G8 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
VPS13BQ7Z7G8 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
VPS13BQ7Z7G8 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.02
VPS13BQ7Z7G8 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.02
VPS13BQ7Z7G8 AC131281.2-201ENST00000520478 145 ntBASIC15.21■□□□□ 0.02
VPS13BQ7Z7G8 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC15.2■□□□□ 0.02
VPS13BQ7Z7G8 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
VPS13BQ7Z7G8 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC15.2■□□□□ 0.02
VPS13BQ7Z7G8 AC087393.1-201ENST00000582896 145 ntBASIC15.2■□□□□ 0.02
VPS13BQ7Z7G8 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
VPS13BQ7Z7G8 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC15.2■□□□□ 0.02
VPS13BQ7Z7G8 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
VPS13BQ7Z7G8 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC15.2■□□□□ 0.02
VPS13BQ7Z7G8 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
VPS13BQ7Z7G8 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 11.1 ms