Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC21.83■■□□□ 1.09
SHFQ7M4L6 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.08
SHFQ7M4L6 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
SHFQ7M4L6 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
SHFQ7M4L6 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
SHFQ7M4L6 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SHFQ7M4L6 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SHFQ7M4L6 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC21.82■■□□□ 1.08
SHFQ7M4L6 LINC01971-201ENST00000617888 1048 ntBASIC21.81■■□□□ 1.08
SHFQ7M4L6 HGH1-207ENST00000628266 258 ntTSL 5 BASIC21.81■■□□□ 1.08
SHFQ7M4L6 CHML-204ENST00000638121 920 ntTSL 2 BASIC21.81■■□□□ 1.08
SHFQ7M4L6 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SHFQ7M4L6 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC21.8■■□□□ 1.08
SHFQ7M4L6 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC21.8■■□□□ 1.08
SHFQ7M4L6 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC21.8■■□□□ 1.08
SHFQ7M4L6 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC21.8■■□□□ 1.08
SHFQ7M4L6 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
SHFQ7M4L6 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SHFQ7M4L6 MED17-227ENST00000640521 2047 ntTSL 5 BASIC21.79■■□□□ 1.08
SHFQ7M4L6 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
SHFQ7M4L6 THRA-202ENST00000394121 2260 ntTSL 2 BASIC21.78■■□□□ 1.08
SHFQ7M4L6 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
SHFQ7M4L6 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
SHFQ7M4L6 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC21.78■■□□□ 1.08
SHFQ7M4L6 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC21.78■■□□□ 1.08
SHFQ7M4L6 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
SHFQ7M4L6 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
SHFQ7M4L6 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
SHFQ7M4L6 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
SHFQ7M4L6 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
SHFQ7M4L6 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC21.77■■□□□ 1.08
SHFQ7M4L6 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SHFQ7M4L6 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SHFQ7M4L6 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SHFQ7M4L6 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SHFQ7M4L6 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC21.77■■□□□ 1.08
SHFQ7M4L6 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
SHFQ7M4L6 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
SHFQ7M4L6 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
SHFQ7M4L6 AC142381.3-201ENST00000568208 1670 ntBASIC21.76■■□□□ 1.07
SHFQ7M4L6 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
SHFQ7M4L6 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SHFQ7M4L6 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
SHFQ7M4L6 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
SHFQ7M4L6 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC21.76■■□□□ 1.07
SHFQ7M4L6 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SHFQ7M4L6 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SHFQ7M4L6 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC21.75■■□□□ 1.07
SHFQ7M4L6 RPS2P35-201ENST00000443417 897 ntBASIC21.75■■□□□ 1.07
SHFQ7M4L6 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SHFQ7M4L6 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC21.75■■□□□ 1.07
SHFQ7M4L6 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SHFQ7M4L6 AC138932.3-201ENST00000567634 1902 ntBASIC21.74■■□□□ 1.07
SHFQ7M4L6 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SHFQ7M4L6 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
SHFQ7M4L6 DUX4L13-201ENST00000554103 1267 ntBASIC21.74■■□□□ 1.07
SHFQ7M4L6 DUX4L15-201ENST00000611059 1267 ntBASIC21.74■■□□□ 1.07
SHFQ7M4L6 DUX4L23-201ENST00000615195 1269 ntBASIC21.74■■□□□ 1.07
SHFQ7M4L6 DUX4L24-201ENST00000617576 1269 ntBASIC21.74■■□□□ 1.07
SHFQ7M4L6 DUX4L22-201ENST00000618238 1269 ntBASIC21.74■■□□□ 1.07
SHFQ7M4L6 DUX4L20-201ENST00000619712 1269 ntBASIC21.74■■□□□ 1.07
SHFQ7M4L6 DUX4L21-201ENST00000622058 1269 ntBASIC21.74■■□□□ 1.07
SHFQ7M4L6 DUX4L10-201ENST00000622460 1267 ntBASIC21.74■■□□□ 1.07
SHFQ7M4L6 DUX4L25-201ENST00000624915 1269 ntBASIC21.74■■□□□ 1.07
SHFQ7M4L6 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
SHFQ7M4L6 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SHFQ7M4L6 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC21.74■■□□□ 1.07
SHFQ7M4L6 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
SHFQ7M4L6 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
SHFQ7M4L6 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SHFQ7M4L6 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC21.73■■□□□ 1.07
SHFQ7M4L6 AC022211.4-201ENST00000625094 2161 ntBASIC21.73■■□□□ 1.07
SHFQ7M4L6 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SHFQ7M4L6 AC008813.1-201ENST00000536597 885 ntBASIC21.73■■□□□ 1.07
SHFQ7M4L6 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
SHFQ7M4L6 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
SHFQ7M4L6 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SHFQ7M4L6 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC21.73■■□□□ 1.07
SHFQ7M4L6 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SHFQ7M4L6 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SHFQ7M4L6 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SHFQ7M4L6 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC21.72■■□□□ 1.07
SHFQ7M4L6 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SHFQ7M4L6 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SHFQ7M4L6 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
SHFQ7M4L6 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
SHFQ7M4L6 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
SHFQ7M4L6 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SHFQ7M4L6 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
SHFQ7M4L6 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
SHFQ7M4L6 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SHFQ7M4L6 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SHFQ7M4L6 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC21.71■■□□□ 1.07
SHFQ7M4L6 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SHFQ7M4L6 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
SHFQ7M4L6 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
SHFQ7M4L6 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
SHFQ7M4L6 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC21.7■■□□□ 1.06
SHFQ7M4L6 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SHFQ7M4L6 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC21.7■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms