Protein–RNA interactions for Protein: Q7L0R7

RNF44, RING finger protein 44, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF44Q7L0R7 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC23.36■■□□□ 1.33
RNF44Q7L0R7 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
RNF44Q7L0R7 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC23.35■■□□□ 1.33
RNF44Q7L0R7 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
RNF44Q7L0R7 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
RNF44Q7L0R7 HES4-204ENST00000484667 667 ntTSL 3 BASIC23.35■■□□□ 1.33
RNF44Q7L0R7 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC23.35■■□□□ 1.33
RNF44Q7L0R7 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
RNF44Q7L0R7 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC23.34■■□□□ 1.33
RNF44Q7L0R7 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC23.34■■□□□ 1.33
RNF44Q7L0R7 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC23.34■■□□□ 1.33
RNF44Q7L0R7 AC133552.2-201ENST00000619106 1032 ntBASIC23.34■■□□□ 1.33
RNF44Q7L0R7 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC23.34■■□□□ 1.33
RNF44Q7L0R7 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
RNF44Q7L0R7 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC23.33■■□□□ 1.33
RNF44Q7L0R7 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC23.33■■□□□ 1.33
RNF44Q7L0R7 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
RNF44Q7L0R7 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC23.33■■□□□ 1.33
RNF44Q7L0R7 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC23.33■■□□□ 1.33
RNF44Q7L0R7 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC23.33■■□□□ 1.33
RNF44Q7L0R7 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC23.33■■□□□ 1.32
RNF44Q7L0R7 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC23.32■■□□□ 1.32
RNF44Q7L0R7 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC23.32■■□□□ 1.32
RNF44Q7L0R7 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
RNF44Q7L0R7 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
RNF44Q7L0R7 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
RNF44Q7L0R7 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC23.31■■□□□ 1.32
RNF44Q7L0R7 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC23.31■■□□□ 1.32
RNF44Q7L0R7 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC23.31■■□□□ 1.32
RNF44Q7L0R7 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
RNF44Q7L0R7 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
RNF44Q7L0R7 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC23.3■■□□□ 1.32
RNF44Q7L0R7 AL121749.1-202ENST00000609313 2153 ntBASIC23.3■■□□□ 1.32
RNF44Q7L0R7 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC23.3■■□□□ 1.32
RNF44Q7L0R7 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
RNF44Q7L0R7 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC23.3■■□□□ 1.32
RNF44Q7L0R7 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
RNF44Q7L0R7 AL592293.1-201ENST00000502889 1188 ntBASIC23.3■■□□□ 1.32
RNF44Q7L0R7 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC23.3■■□□□ 1.32
RNF44Q7L0R7 KRT18P60-201ENST00000312876 1297 ntBASIC23.29■■□□□ 1.32
RNF44Q7L0R7 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
RNF44Q7L0R7 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC23.29■■□□□ 1.32
RNF44Q7L0R7 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC23.29■■□□□ 1.32
RNF44Q7L0R7 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC23.29■■□□□ 1.32
RNF44Q7L0R7 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
RNF44Q7L0R7 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
RNF44Q7L0R7 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
RNF44Q7L0R7 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
RNF44Q7L0R7 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC23.28■■□□□ 1.32
RNF44Q7L0R7 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC23.27■■□□□ 1.32
RNF44Q7L0R7 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
RNF44Q7L0R7 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC23.27■■□□□ 1.32
RNF44Q7L0R7 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC23.27■■□□□ 1.32
RNF44Q7L0R7 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC23.27■■□□□ 1.32
RNF44Q7L0R7 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC23.27■■□□□ 1.32
RNF44Q7L0R7 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC23.27■■□□□ 1.32
RNF44Q7L0R7 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC23.27■■□□□ 1.32
RNF44Q7L0R7 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
RNF44Q7L0R7 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC23.27■■□□□ 1.32
RNF44Q7L0R7 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
RNF44Q7L0R7 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC23.26■■□□□ 1.31
RNF44Q7L0R7 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC23.26■■□□□ 1.31
RNF44Q7L0R7 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC23.26■■□□□ 1.31
RNF44Q7L0R7 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC23.26■■□□□ 1.31
RNF44Q7L0R7 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
RNF44Q7L0R7 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
RNF44Q7L0R7 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC23.25■■□□□ 1.31
RNF44Q7L0R7 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC23.25■■□□□ 1.31
RNF44Q7L0R7 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC23.25■■□□□ 1.31
RNF44Q7L0R7 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
RNF44Q7L0R7 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
RNF44Q7L0R7 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC23.24■■□□□ 1.31
RNF44Q7L0R7 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
RNF44Q7L0R7 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
RNF44Q7L0R7 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
RNF44Q7L0R7 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
RNF44Q7L0R7 PKM-203ENST00000389093 2279 ntTSL 5 BASIC23.23■■□□□ 1.31
RNF44Q7L0R7 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
RNF44Q7L0R7 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
RNF44Q7L0R7 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
RNF44Q7L0R7 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
RNF44Q7L0R7 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
RNF44Q7L0R7 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
RNF44Q7L0R7 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC23.22■■□□□ 1.31
RNF44Q7L0R7 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC23.22■■□□□ 1.31
RNF44Q7L0R7 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC23.22■■□□□ 1.31
RNF44Q7L0R7 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
RNF44Q7L0R7 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC23.22■■□□□ 1.31
RNF44Q7L0R7 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC23.22■■□□□ 1.31
RNF44Q7L0R7 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC23.22■■□□□ 1.31
RNF44Q7L0R7 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
RNF44Q7L0R7 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
RNF44Q7L0R7 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC23.21■■□□□ 1.31
RNF44Q7L0R7 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
RNF44Q7L0R7 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC23.21■■□□□ 1.31
RNF44Q7L0R7 AC129492.7-201ENST00000622992 756 ntBASIC23.21■■□□□ 1.31
RNF44Q7L0R7 AC012354.3-201ENST00000623734 483 ntBASIC23.21■■□□□ 1.31
RNF44Q7L0R7 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
RNF44Q7L0R7 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC23.21■■□□□ 1.31
RNF44Q7L0R7 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Retrieved 100 of 98,524 protein–RNA pairs in 14.7 ms