Protein–RNA interactions for Protein: Q71RC9

SMIM5, Small integral membrane protein 5, humanhuman

Predictions only

Length 77 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM5Q71RC9 AC087393.1-201ENST00000582896 145 ntBASIC31.38■■■□□ 2.61
SMIM5Q71RC9 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
SMIM5Q71RC9 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC31.37■■■□□ 2.61
SMIM5Q71RC9 TK2-216ENST00000564917 1156 ntTSL 3 BASIC31.37■■■□□ 2.61
SMIM5Q71RC9 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC31.36■■■□□ 2.61
SMIM5Q71RC9 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC31.36■■■□□ 2.61
SMIM5Q71RC9 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC31.36■■■□□ 2.61
SMIM5Q71RC9 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
SMIM5Q71RC9 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC31.36■■■□□ 2.61
SMIM5Q71RC9 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC31.36■■■□□ 2.61
SMIM5Q71RC9 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC31.36■■■□□ 2.61
SMIM5Q71RC9 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
SMIM5Q71RC9 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
SMIM5Q71RC9 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC31.35■■■□□ 2.61
SMIM5Q71RC9 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC31.35■■■□□ 2.61
SMIM5Q71RC9 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC31.35■■■□□ 2.61
SMIM5Q71RC9 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC31.35■■■□□ 2.61
SMIM5Q71RC9 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC31.34■■■□□ 2.61
SMIM5Q71RC9 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
SMIM5Q71RC9 AC019171.1-201ENST00000601251 1056 ntBASIC31.34■■■□□ 2.61
SMIM5Q71RC9 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC31.34■■■□□ 2.61
SMIM5Q71RC9 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC31.33■■■□□ 2.61
SMIM5Q71RC9 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC31.33■■■□□ 2.61
SMIM5Q71RC9 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC31.33■■■□□ 2.61
SMIM5Q71RC9 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC31.33■■■□□ 2.61
SMIM5Q71RC9 PEMT-206ENST00000435340 960 ntTSL 5 BASIC31.33■■■□□ 2.61
SMIM5Q71RC9 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
SMIM5Q71RC9 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC31.33■■■□□ 2.61
SMIM5Q71RC9 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC31.33■■■□□ 2.61
SMIM5Q71RC9 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC31.33■■■□□ 2.61
SMIM5Q71RC9 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC31.33■■■□□ 2.61
SMIM5Q71RC9 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
SMIM5Q71RC9 LONRF2P2-201ENST00000439212 571 ntBASIC31.32■■■□□ 2.6
SMIM5Q71RC9 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC31.32■■■□□ 2.6
SMIM5Q71RC9 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC31.32■■■□□ 2.6
SMIM5Q71RC9 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC31.32■■■□□ 2.6
SMIM5Q71RC9 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC31.31■■■□□ 2.6
SMIM5Q71RC9 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC31.31■■■□□ 2.6
SMIM5Q71RC9 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC31.3■■■□□ 2.6
SMIM5Q71RC9 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC31.3■■■□□ 2.6
SMIM5Q71RC9 UNC93B8-201ENST00000511903 705 ntBASIC31.3■■■□□ 2.6
SMIM5Q71RC9 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
SMIM5Q71RC9 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC31.29■■■□□ 2.6
SMIM5Q71RC9 RPS2P7-201ENST00000447334 885 ntBASIC31.29■■■□□ 2.6
SMIM5Q71RC9 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC31.29■■■□□ 2.6
SMIM5Q71RC9 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
SMIM5Q71RC9 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
SMIM5Q71RC9 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC31.28■■■□□ 2.6
SMIM5Q71RC9 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC31.28■■■□□ 2.6
SMIM5Q71RC9 Z92544.1-202ENST00000571933 1220 ntBASIC31.28■■■□□ 2.6
SMIM5Q71RC9 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC31.27■■■□□ 2.6
SMIM5Q71RC9 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC31.27■■■□□ 2.6
SMIM5Q71RC9 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC31.27■■■□□ 2.6
SMIM5Q71RC9 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC31.27■■■□□ 2.6
SMIM5Q71RC9 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC31.27■■■□□ 2.6
SMIM5Q71RC9 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC31.27■■■□□ 2.6
SMIM5Q71RC9 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC31.27■■■□□ 2.6
SMIM5Q71RC9 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC31.27■■■□□ 2.6
SMIM5Q71RC9 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC31.27■■■□□ 2.6
SMIM5Q71RC9 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC31.25■■■□□ 2.59
SMIM5Q71RC9 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC31.25■■■□□ 2.59
SMIM5Q71RC9 MIR4787-201ENST00000607364 84 ntBASIC31.25■■■□□ 2.59
SMIM5Q71RC9 WHAMMP3-201ENST00000611636 1609 ntBASIC31.24■■■□□ 2.59
SMIM5Q71RC9 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC31.24■■■□□ 2.59
SMIM5Q71RC9 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC31.24■■■□□ 2.59
SMIM5Q71RC9 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC31.24■■■□□ 2.59
SMIM5Q71RC9 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
SMIM5Q71RC9 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC31.23■■■□□ 2.59
SMIM5Q71RC9 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
SMIM5Q71RC9 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC31.23■■■□□ 2.59
SMIM5Q71RC9 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC31.23■■■□□ 2.59
SMIM5Q71RC9 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC31.23■■■□□ 2.59
SMIM5Q71RC9 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
SMIM5Q71RC9 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
SMIM5Q71RC9 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC31.22■■■□□ 2.59
SMIM5Q71RC9 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
SMIM5Q71RC9 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
SMIM5Q71RC9 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC31.21■■■□□ 2.59
SMIM5Q71RC9 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC31.21■■■□□ 2.59
SMIM5Q71RC9 MIR638-201ENST00000385237 100 ntBASIC31.21■■■□□ 2.59
SMIM5Q71RC9 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC31.21■■■□□ 2.59
SMIM5Q71RC9 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC31.2■■■□□ 2.58
SMIM5Q71RC9 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC31.2■■■□□ 2.58
SMIM5Q71RC9 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
SMIM5Q71RC9 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC31.19■■■□□ 2.58
SMIM5Q71RC9 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC31.19■■■□□ 2.58
SMIM5Q71RC9 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC31.19■■■□□ 2.58
SMIM5Q71RC9 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC31.18■■■□□ 2.58
SMIM5Q71RC9 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC31.18■■■□□ 2.58
SMIM5Q71RC9 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC31.18■■■□□ 2.58
SMIM5Q71RC9 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
SMIM5Q71RC9 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC31.17■■■□□ 2.58
SMIM5Q71RC9 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
SMIM5Q71RC9 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC31.17■■■□□ 2.58
SMIM5Q71RC9 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC31.17■■■□□ 2.58
SMIM5Q71RC9 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC31.17■■■□□ 2.58
SMIM5Q71RC9 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC31.17■■■□□ 2.58
SMIM5Q71RC9 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC31.17■■■□□ 2.58
SMIM5Q71RC9 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC31.17■■■□□ 2.58
SMIM5Q71RC9 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
Retrieved 100 of 98,524 protein–RNA pairs in 10.9 ms