Protein–RNA interactions for Protein: Q6ZWI9

RFPL4B, Ret finger protein-like 4B, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL4BQ6ZWI9 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC21.54■■□□□ 1.04
RFPL4BQ6ZWI9 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
RFPL4BQ6ZWI9 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC21.53■■□□□ 1.04
RFPL4BQ6ZWI9 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
RFPL4BQ6ZWI9 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
RFPL4BQ6ZWI9 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC21.53■■□□□ 1.04
RFPL4BQ6ZWI9 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC21.53■■□□□ 1.04
RFPL4BQ6ZWI9 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC21.53■■□□□ 1.04
RFPL4BQ6ZWI9 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
RFPL4BQ6ZWI9 CLDN5-201ENST00000403084 2357 ntBASIC21.53■■□□□ 1.04
RFPL4BQ6ZWI9 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
RFPL4BQ6ZWI9 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
RFPL4BQ6ZWI9 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
RFPL4BQ6ZWI9 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
RFPL4BQ6ZWI9 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
RFPL4BQ6ZWI9 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
RFPL4BQ6ZWI9 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
RFPL4BQ6ZWI9 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC21.52■■□□□ 1.04
RFPL4BQ6ZWI9 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
RFPL4BQ6ZWI9 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
RFPL4BQ6ZWI9 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
RFPL4BQ6ZWI9 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
RFPL4BQ6ZWI9 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
RFPL4BQ6ZWI9 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
RFPL4BQ6ZWI9 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC21.52■■□□□ 1.04
RFPL4BQ6ZWI9 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
RFPL4BQ6ZWI9 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
RFPL4BQ6ZWI9 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
RFPL4BQ6ZWI9 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
RFPL4BQ6ZWI9 AC133561.1-201ENST00000568600 2415 ntBASIC21.51■■□□□ 1.03
RFPL4BQ6ZWI9 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
RFPL4BQ6ZWI9 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC21.51■■□□□ 1.03
RFPL4BQ6ZWI9 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
RFPL4BQ6ZWI9 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC21.51■■□□□ 1.03
RFPL4BQ6ZWI9 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC21.51■■□□□ 1.03
RFPL4BQ6ZWI9 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
RFPL4BQ6ZWI9 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC21.51■■□□□ 1.03
RFPL4BQ6ZWI9 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC21.5■■□□□ 1.03
RFPL4BQ6ZWI9 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
RFPL4BQ6ZWI9 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
RFPL4BQ6ZWI9 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
RFPL4BQ6ZWI9 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
RFPL4BQ6ZWI9 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
RFPL4BQ6ZWI9 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC21.49■■□□□ 1.03
RFPL4BQ6ZWI9 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC21.49■■□□□ 1.03
RFPL4BQ6ZWI9 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
RFPL4BQ6ZWI9 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC21.49■■□□□ 1.03
RFPL4BQ6ZWI9 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
RFPL4BQ6ZWI9 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
RFPL4BQ6ZWI9 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
RFPL4BQ6ZWI9 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC21.48■■□□□ 1.03
RFPL4BQ6ZWI9 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
RFPL4BQ6ZWI9 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
RFPL4BQ6ZWI9 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC21.48■■□□□ 1.03
RFPL4BQ6ZWI9 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
RFPL4BQ6ZWI9 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
RFPL4BQ6ZWI9 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC21.47■■□□□ 1.03
RFPL4BQ6ZWI9 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC21.47■■□□□ 1.03
RFPL4BQ6ZWI9 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
RFPL4BQ6ZWI9 MED25-210ENST00000612854 801 ntTSL 5 BASIC21.47■■□□□ 1.03
RFPL4BQ6ZWI9 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
RFPL4BQ6ZWI9 MED25-214ENST00000622402 642 ntTSL 5 BASIC21.47■■□□□ 1.03
RFPL4BQ6ZWI9 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
RFPL4BQ6ZWI9 WHAMMP3-201ENST00000611636 1609 ntBASIC21.47■■□□□ 1.03
RFPL4BQ6ZWI9 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
RFPL4BQ6ZWI9 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
RFPL4BQ6ZWI9 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
RFPL4BQ6ZWI9 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
RFPL4BQ6ZWI9 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
RFPL4BQ6ZWI9 LINC00543-201ENST00000567234 1845 ntBASIC21.45■■□□□ 1.03
RFPL4BQ6ZWI9 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
RFPL4BQ6ZWI9 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
RFPL4BQ6ZWI9 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
RFPL4BQ6ZWI9 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
RFPL4BQ6ZWI9 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC21.44■■□□□ 1.02
RFPL4BQ6ZWI9 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
RFPL4BQ6ZWI9 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC21.44■■□□□ 1.02
RFPL4BQ6ZWI9 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC21.44■■□□□ 1.02
RFPL4BQ6ZWI9 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
RFPL4BQ6ZWI9 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC21.44■■□□□ 1.02
RFPL4BQ6ZWI9 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC21.44■■□□□ 1.02
RFPL4BQ6ZWI9 SRP68-213ENST00000629930 165 ntTSL 5 BASIC21.44■■□□□ 1.02
RFPL4BQ6ZWI9 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
RFPL4BQ6ZWI9 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
RFPL4BQ6ZWI9 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
RFPL4BQ6ZWI9 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC21.44■■□□□ 1.02
RFPL4BQ6ZWI9 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
RFPL4BQ6ZWI9 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
RFPL4BQ6ZWI9 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC21.43■■□□□ 1.02
RFPL4BQ6ZWI9 TPT1-202ENST00000379055 948 ntTSL 2 BASIC21.43■■□□□ 1.02
RFPL4BQ6ZWI9 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
RFPL4BQ6ZWI9 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
RFPL4BQ6ZWI9 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
RFPL4BQ6ZWI9 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
RFPL4BQ6ZWI9 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
RFPL4BQ6ZWI9 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC21.42■■□□□ 1.02
RFPL4BQ6ZWI9 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
RFPL4BQ6ZWI9 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
RFPL4BQ6ZWI9 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
RFPL4BQ6ZWI9 AL359258.2-201ENST00000564063 1566 ntBASIC21.41■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms