Protein–RNA interactions for Protein: Q6ZV77

C9orf139, Uncharacterized protein C9orf139, humanhuman

Predictions only

Length 190 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf139Q6ZV77 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
C9orf139Q6ZV77 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
C9orf139Q6ZV77 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
C9orf139Q6ZV77 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
C9orf139Q6ZV77 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
C9orf139Q6ZV77 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
C9orf139Q6ZV77 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
C9orf139Q6ZV77 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
C9orf139Q6ZV77 AL035685.1-201ENST00000636663 812 ntBASIC19.75■□□□□ 0.75
C9orf139Q6ZV77 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC19.75■□□□□ 0.75
C9orf139Q6ZV77 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC19.74■□□□□ 0.75
C9orf139Q6ZV77 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
C9orf139Q6ZV77 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
C9orf139Q6ZV77 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
C9orf139Q6ZV77 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
C9orf139Q6ZV77 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
C9orf139Q6ZV77 AL451085.2-201ENST00000605085 799 ntBASIC19.74■□□□□ 0.75
C9orf139Q6ZV77 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC19.74■□□□□ 0.75
C9orf139Q6ZV77 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC19.73■□□□□ 0.75
C9orf139Q6ZV77 DRD5P2-201ENST00000421395 2012 ntBASIC19.73■□□□□ 0.75
C9orf139Q6ZV77 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
C9orf139Q6ZV77 BEX3-202ENST00000372634 753 ntTSL 2 BASIC19.73■□□□□ 0.75
C9orf139Q6ZV77 YBX1P4-201ENST00000392794 808 ntBASIC19.73■□□□□ 0.75
C9orf139Q6ZV77 MTX2-204ENST00000443241 799 ntTSL 3 BASIC19.73■□□□□ 0.75
C9orf139Q6ZV77 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC19.73■□□□□ 0.75
C9orf139Q6ZV77 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC19.73■□□□□ 0.75
C9orf139Q6ZV77 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
C9orf139Q6ZV77 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
C9orf139Q6ZV77 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC19.72■□□□□ 0.75
C9orf139Q6ZV77 IDNK-201ENST00000376417 511 ntTSL 5 BASIC19.72■□□□□ 0.75
C9orf139Q6ZV77 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
C9orf139Q6ZV77 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
C9orf139Q6ZV77 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
C9orf139Q6ZV77 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
C9orf139Q6ZV77 MIR4508-201ENST00000584178 70 ntBASIC19.72■□□□□ 0.75
C9orf139Q6ZV77 AC019171.1-201ENST00000601251 1056 ntBASIC19.72■□□□□ 0.75
C9orf139Q6ZV77 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC19.72■□□□□ 0.75
C9orf139Q6ZV77 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
C9orf139Q6ZV77 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC19.71■□□□□ 0.75
C9orf139Q6ZV77 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC19.71■□□□□ 0.75
C9orf139Q6ZV77 AC103834.1-201ENST00000520383 144 ntBASIC19.71■□□□□ 0.75
C9orf139Q6ZV77 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
C9orf139Q6ZV77 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
C9orf139Q6ZV77 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
C9orf139Q6ZV77 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
C9orf139Q6ZV77 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
C9orf139Q6ZV77 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
C9orf139Q6ZV77 TRIR-205ENST00000592273 783 ntTSL 3 BASIC19.69■□□□□ 0.74
C9orf139Q6ZV77 PVT1_1.1-201ENST00000615125 194 ntBASIC19.69■□□□□ 0.74
C9orf139Q6ZV77 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
C9orf139Q6ZV77 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC19.69■□□□□ 0.74
C9orf139Q6ZV77 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC19.68■□□□□ 0.74
C9orf139Q6ZV77 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC19.68■□□□□ 0.74
C9orf139Q6ZV77 LINC01003-201ENST00000564834 1764 ntBASIC19.68■□□□□ 0.74
C9orf139Q6ZV77 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC19.68■□□□□ 0.74
C9orf139Q6ZV77 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC19.68■□□□□ 0.74
C9orf139Q6ZV77 AC087393.1-201ENST00000582896 145 ntBASIC19.68■□□□□ 0.74
C9orf139Q6ZV77 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
C9orf139Q6ZV77 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
C9orf139Q6ZV77 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
C9orf139Q6ZV77 KRT8P33-201ENST00000508125 1423 ntBASIC19.68■□□□□ 0.74
C9orf139Q6ZV77 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
C9orf139Q6ZV77 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
C9orf139Q6ZV77 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC19.67■□□□□ 0.74
C9orf139Q6ZV77 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
C9orf139Q6ZV77 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
C9orf139Q6ZV77 AL449106.1-201ENST00000608517 1980 ntBASIC19.67■□□□□ 0.74
C9orf139Q6ZV77 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
C9orf139Q6ZV77 KRT18P10-201ENST00000388836 1287 ntBASIC19.67■□□□□ 0.74
C9orf139Q6ZV77 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC19.67■□□□□ 0.74
C9orf139Q6ZV77 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
C9orf139Q6ZV77 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
C9orf139Q6ZV77 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
C9orf139Q6ZV77 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
C9orf139Q6ZV77 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
C9orf139Q6ZV77 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
C9orf139Q6ZV77 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
C9orf139Q6ZV77 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
C9orf139Q6ZV77 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
C9orf139Q6ZV77 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
C9orf139Q6ZV77 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
C9orf139Q6ZV77 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
C9orf139Q6ZV77 AC142086.6-201ENST00000621154 1765 ntBASIC19.65■□□□□ 0.74
C9orf139Q6ZV77 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.74
C9orf139Q6ZV77 RPS2P7-201ENST00000447334 885 ntBASIC19.64■□□□□ 0.73
C9orf139Q6ZV77 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
C9orf139Q6ZV77 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
C9orf139Q6ZV77 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
C9orf139Q6ZV77 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
C9orf139Q6ZV77 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
C9orf139Q6ZV77 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
C9orf139Q6ZV77 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC19.63■□□□□ 0.73
C9orf139Q6ZV77 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
C9orf139Q6ZV77 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
C9orf139Q6ZV77 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
C9orf139Q6ZV77 AC009299.2-201ENST00000482477 511 ntBASIC19.63■□□□□ 0.73
C9orf139Q6ZV77 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
C9orf139Q6ZV77 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
C9orf139Q6ZV77 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
C9orf139Q6ZV77 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC19.62■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms