Protein–RNA interactions for Protein: Q6ISU1

PTCRA, Pre T-cell antigen receptor alpha, humanhuman

Predicted RBP Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCRAQ6ISU1 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
PTCRAQ6ISU1 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC25.69■■□□□ 1.7
PTCRAQ6ISU1 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
PTCRAQ6ISU1 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC25.68■■□□□ 1.7
PTCRAQ6ISU1 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC25.68■■□□□ 1.7
PTCRAQ6ISU1 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
PTCRAQ6ISU1 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC25.67■■□□□ 1.7
PTCRAQ6ISU1 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC25.67■■□□□ 1.7
PTCRAQ6ISU1 AC131281.2-201ENST00000520478 145 ntBASIC25.67■■□□□ 1.7
PTCRAQ6ISU1 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
PTCRAQ6ISU1 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC25.67■■□□□ 1.7
PTCRAQ6ISU1 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
PTCRAQ6ISU1 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
PTCRAQ6ISU1 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC25.66■■□□□ 1.7
PTCRAQ6ISU1 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC25.66■■□□□ 1.7
PTCRAQ6ISU1 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
PTCRAQ6ISU1 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC25.65■■□□□ 1.7
PTCRAQ6ISU1 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC25.65■■□□□ 1.7
PTCRAQ6ISU1 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
PTCRAQ6ISU1 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC25.65■■□□□ 1.7
PTCRAQ6ISU1 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
PTCRAQ6ISU1 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC25.65■■□□□ 1.7
PTCRAQ6ISU1 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC25.65■■□□□ 1.7
PTCRAQ6ISU1 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
PTCRAQ6ISU1 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC25.64■■□□□ 1.7
PTCRAQ6ISU1 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC25.64■■□□□ 1.7
PTCRAQ6ISU1 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
PTCRAQ6ISU1 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
PTCRAQ6ISU1 AL136116.3-201ENST00000402907 1138 ntBASIC25.64■■□□□ 1.7
PTCRAQ6ISU1 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC25.64■■□□□ 1.69
PTCRAQ6ISU1 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC25.63■■□□□ 1.69
PTCRAQ6ISU1 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
PTCRAQ6ISU1 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC25.63■■□□□ 1.69
PTCRAQ6ISU1 RPP21-222ENST00000433076 577 ntTSL 2 BASIC25.63■■□□□ 1.69
PTCRAQ6ISU1 SRR-208ENST00000576848 588 ntTSL 4 BASIC25.63■■□□□ 1.69
PTCRAQ6ISU1 AC092666.2-201ENST00000613287 246 ntBASIC25.63■■□□□ 1.69
PTCRAQ6ISU1 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
PTCRAQ6ISU1 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC25.63■■□□□ 1.69
PTCRAQ6ISU1 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
PTCRAQ6ISU1 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC25.63■■□□□ 1.69
PTCRAQ6ISU1 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
PTCRAQ6ISU1 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
PTCRAQ6ISU1 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
PTCRAQ6ISU1 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
PTCRAQ6ISU1 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC25.62■■□□□ 1.69
PTCRAQ6ISU1 AC005837.3-201ENST00000612163 286 ntBASIC25.62■■□□□ 1.69
PTCRAQ6ISU1 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
PTCRAQ6ISU1 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
PTCRAQ6ISU1 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC25.6■■□□□ 1.69
PTCRAQ6ISU1 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
PTCRAQ6ISU1 AC022616.5-201ENST00000518796 181 ntBASIC25.6■■□□□ 1.69
PTCRAQ6ISU1 AC110285.6-201ENST00000617652 491 ntBASIC25.6■■□□□ 1.69
PTCRAQ6ISU1 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC25.6■■□□□ 1.69
PTCRAQ6ISU1 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
PTCRAQ6ISU1 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
PTCRAQ6ISU1 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
PTCRAQ6ISU1 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
PTCRAQ6ISU1 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC25.59■■□□□ 1.69
PTCRAQ6ISU1 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC25.59■■□□□ 1.69
PTCRAQ6ISU1 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC25.59■■□□□ 1.69
PTCRAQ6ISU1 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
PTCRAQ6ISU1 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
PTCRAQ6ISU1 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC25.58■■□□□ 1.69
PTCRAQ6ISU1 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC25.58■■□□□ 1.69
PTCRAQ6ISU1 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
PTCRAQ6ISU1 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
PTCRAQ6ISU1 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC25.57■■□□□ 1.68
PTCRAQ6ISU1 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC25.57■■□□□ 1.68
PTCRAQ6ISU1 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
PTCRAQ6ISU1 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
PTCRAQ6ISU1 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
PTCRAQ6ISU1 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC25.56■■□□□ 1.68
PTCRAQ6ISU1 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC25.56■■□□□ 1.68
PTCRAQ6ISU1 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
PTCRAQ6ISU1 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
PTCRAQ6ISU1 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
PTCRAQ6ISU1 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC25.55■■□□□ 1.68
PTCRAQ6ISU1 AC137630.3-201ENST00000607245 391 ntBASIC25.55■■□□□ 1.68
PTCRAQ6ISU1 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
PTCRAQ6ISU1 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC25.55■■□□□ 1.68
PTCRAQ6ISU1 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC25.55■■□□□ 1.68
PTCRAQ6ISU1 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC25.54■■□□□ 1.68
PTCRAQ6ISU1 KRT18P24-201ENST00000344739 1156 ntBASIC25.54■■□□□ 1.68
PTCRAQ6ISU1 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC25.54■■□□□ 1.68
PTCRAQ6ISU1 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
PTCRAQ6ISU1 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC25.54■■□□□ 1.68
PTCRAQ6ISU1 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC25.53■■□□□ 1.68
PTCRAQ6ISU1 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
PTCRAQ6ISU1 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
PTCRAQ6ISU1 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
PTCRAQ6ISU1 AC021242.3-201ENST00000607598 1377 ntBASIC25.53■■□□□ 1.68
PTCRAQ6ISU1 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
PTCRAQ6ISU1 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC25.52■■□□□ 1.68
PTCRAQ6ISU1 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
PTCRAQ6ISU1 AC096631.2-201ENST00000436136 790 ntBASIC25.52■■□□□ 1.68
PTCRAQ6ISU1 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
PTCRAQ6ISU1 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
PTCRAQ6ISU1 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
PTCRAQ6ISU1 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC25.51■■□□□ 1.67
PTCRAQ6ISU1 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC25.51■■□□□ 1.67
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms