Protein–RNA interactions for Protein: Q4JDL3

PTPN20, Tyrosine-protein phosphatase non-receptor type 20, humanhuman

Predictions only

Length 420 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20Q4JDL3 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC25.76■■□□□ 1.71
PTPN20Q4JDL3 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
PTPN20Q4JDL3 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
PTPN20Q4JDL3 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
PTPN20Q4JDL3 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
PTPN20Q4JDL3 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC25.76■■□□□ 1.71
PTPN20Q4JDL3 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
PTPN20Q4JDL3 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC25.75■■□□□ 1.71
PTPN20Q4JDL3 ABHD17AP3-201ENST00000503096 1137 ntBASIC25.75■■□□□ 1.71
PTPN20Q4JDL3 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC25.74■■□□□ 1.71
PTPN20Q4JDL3 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC25.74■■□□□ 1.71
PTPN20Q4JDL3 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC25.74■■□□□ 1.71
PTPN20Q4JDL3 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC25.74■■□□□ 1.71
PTPN20Q4JDL3 ECEL1P2-201ENST00000461596 1295 ntBASIC25.74■■□□□ 1.71
PTPN20Q4JDL3 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC25.74■■□□□ 1.71
PTPN20Q4JDL3 AC092803.2-201ENST00000564287 1899 ntBASIC25.74■■□□□ 1.71
PTPN20Q4JDL3 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC25.73■■□□□ 1.71
PTPN20Q4JDL3 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
PTPN20Q4JDL3 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
PTPN20Q4JDL3 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC25.72■■□□□ 1.71
PTPN20Q4JDL3 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
PTPN20Q4JDL3 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
PTPN20Q4JDL3 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC25.72■■□□□ 1.71
PTPN20Q4JDL3 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
PTPN20Q4JDL3 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC25.72■■□□□ 1.71
PTPN20Q4JDL3 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC25.72■■□□□ 1.71
PTPN20Q4JDL3 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
PTPN20Q4JDL3 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC25.72■■□□□ 1.71
PTPN20Q4JDL3 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC25.72■■□□□ 1.71
PTPN20Q4JDL3 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC25.71■■□□□ 1.71
PTPN20Q4JDL3 SMPD5-203ENST00000639008 1464 ntBASIC25.71■■□□□ 1.71
PTPN20Q4JDL3 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC25.7■■□□□ 1.7
PTPN20Q4JDL3 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
PTPN20Q4JDL3 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC25.7■■□□□ 1.7
PTPN20Q4JDL3 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
PTPN20Q4JDL3 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC25.7■■□□□ 1.7
PTPN20Q4JDL3 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC25.69■■□□□ 1.7
PTPN20Q4JDL3 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
PTPN20Q4JDL3 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
PTPN20Q4JDL3 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC25.69■■□□□ 1.7
PTPN20Q4JDL3 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC25.69■■□□□ 1.7
PTPN20Q4JDL3 PFN2-211ENST00000489155 636 ntTSL 4 BASIC25.69■■□□□ 1.7
PTPN20Q4JDL3 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC25.69■■□□□ 1.7
PTPN20Q4JDL3 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
PTPN20Q4JDL3 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
PTPN20Q4JDL3 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
PTPN20Q4JDL3 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC25.68■■□□□ 1.7
PTPN20Q4JDL3 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC25.68■■□□□ 1.7
PTPN20Q4JDL3 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC25.68■■□□□ 1.7
PTPN20Q4JDL3 AC145676.1-201ENST00000514988 2004 ntBASIC25.67■■□□□ 1.7
PTPN20Q4JDL3 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC25.67■■□□□ 1.7
PTPN20Q4JDL3 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
PTPN20Q4JDL3 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
PTPN20Q4JDL3 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC25.66■■□□□ 1.7
PTPN20Q4JDL3 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC25.66■■□□□ 1.7
PTPN20Q4JDL3 SHF-207ENST00000560540 2062 ntTSL 5 BASIC25.66■■□□□ 1.7
PTPN20Q4JDL3 ERN1-208ENST00000606895 2068 ntBASIC25.66■■□□□ 1.7
PTPN20Q4JDL3 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC25.66■■□□□ 1.7
PTPN20Q4JDL3 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC25.65■■□□□ 1.7
PTPN20Q4JDL3 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
PTPN20Q4JDL3 DUSP8P4-201ENST00000399538 1761 ntBASIC25.65■■□□□ 1.7
PTPN20Q4JDL3 HES4-202ENST00000428771 1040 ntTSL 2 BASIC25.65■■□□□ 1.7
PTPN20Q4JDL3 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC25.65■■□□□ 1.7
PTPN20Q4JDL3 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC25.65■■□□□ 1.7
PTPN20Q4JDL3 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC25.65■■□□□ 1.7
PTPN20Q4JDL3 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
PTPN20Q4JDL3 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC25.65■■□□□ 1.7
PTPN20Q4JDL3 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC25.65■■□□□ 1.7
PTPN20Q4JDL3 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
PTPN20Q4JDL3 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
PTPN20Q4JDL3 REST-210ENST00000638187 1334 ntTSL 5 BASIC25.64■■□□□ 1.7
PTPN20Q4JDL3 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC25.64■■□□□ 1.7
PTPN20Q4JDL3 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
PTPN20Q4JDL3 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC25.64■■□□□ 1.7
PTPN20Q4JDL3 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC25.64■■□□□ 1.69
PTPN20Q4JDL3 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
PTPN20Q4JDL3 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC25.64■■□□□ 1.69
PTPN20Q4JDL3 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
PTPN20Q4JDL3 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
PTPN20Q4JDL3 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
PTPN20Q4JDL3 MIR3960-201ENST00000583311 91 ntBASIC25.63■■□□□ 1.69
PTPN20Q4JDL3 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC25.63■■□□□ 1.69
PTPN20Q4JDL3 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
PTPN20Q4JDL3 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC25.62■■□□□ 1.69
PTPN20Q4JDL3 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC25.62■■□□□ 1.69
PTPN20Q4JDL3 HSD17B1P1-201ENST00000590052 955 ntBASIC25.62■■□□□ 1.69
PTPN20Q4JDL3 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
PTPN20Q4JDL3 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC25.62■■□□□ 1.69
PTPN20Q4JDL3 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC25.61■■□□□ 1.69
PTPN20Q4JDL3 AC007029.1-201ENST00000604183 313 ntBASIC25.61■■□□□ 1.69
PTPN20Q4JDL3 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC25.61■■□□□ 1.69
PTPN20Q4JDL3 RNF126P1-201ENST00000567452 1320 ntBASIC25.61■■□□□ 1.69
PTPN20Q4JDL3 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC25.6■■□□□ 1.69
PTPN20Q4JDL3 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
PTPN20Q4JDL3 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC25.6■■□□□ 1.69
PTPN20Q4JDL3 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC25.6■■□□□ 1.69
PTPN20Q4JDL3 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
PTPN20Q4JDL3 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
PTPN20Q4JDL3 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
PTPN20Q4JDL3 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC25.59■■□□□ 1.69
Retrieved 100 of 98,524 protein–RNA pairs in 165 ms