Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC29.63■■■□□ 2.33
PDS5AQ29RF7 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC29.63■■■□□ 2.33
PDS5AQ29RF7 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC29.63■■■□□ 2.33
PDS5AQ29RF7 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC29.63■■■□□ 2.33
PDS5AQ29RF7 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC29.63■■■□□ 2.33
PDS5AQ29RF7 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC29.63■■■□□ 2.33
PDS5AQ29RF7 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC29.63■■■□□ 2.33
PDS5AQ29RF7 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC29.63■■■□□ 2.33
PDS5AQ29RF7 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC29.62■■■□□ 2.33
PDS5AQ29RF7 AC142472.1-201ENST00000612013 1741 ntBASIC29.62■■■□□ 2.33
PDS5AQ29RF7 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC29.62■■■□□ 2.33
PDS5AQ29RF7 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC29.62■■■□□ 2.33
PDS5AQ29RF7 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC29.62■■■□□ 2.33
PDS5AQ29RF7 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC29.62■■■□□ 2.33
PDS5AQ29RF7 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC29.62■■■□□ 2.33
PDS5AQ29RF7 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC29.61■■■□□ 2.33
PDS5AQ29RF7 IDNK-203ENST00000405990 629 ntTSL 2 BASIC29.61■■■□□ 2.33
PDS5AQ29RF7 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC29.6■■■□□ 2.33
PDS5AQ29RF7 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC29.6■■■□□ 2.33
PDS5AQ29RF7 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC29.6■■■□□ 2.33
PDS5AQ29RF7 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC29.6■■■□□ 2.33
PDS5AQ29RF7 AC018755.3-202ENST00000596210 929 ntBASIC29.59■■■□□ 2.33
PDS5AQ29RF7 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC29.59■■■□□ 2.33
PDS5AQ29RF7 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC29.58■■■□□ 2.33
PDS5AQ29RF7 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC29.58■■■□□ 2.33
PDS5AQ29RF7 AC074183.2-201ENST00000623112 922 ntBASIC29.58■■■□□ 2.33
PDS5AQ29RF7 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC29.58■■■□□ 2.33
PDS5AQ29RF7 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC29.57■■■□□ 2.32
PDS5AQ29RF7 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC29.57■■■□□ 2.32
PDS5AQ29RF7 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC29.57■■■□□ 2.32
PDS5AQ29RF7 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC29.56■■■□□ 2.32
PDS5AQ29RF7 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC29.56■■■□□ 2.32
PDS5AQ29RF7 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC29.56■■■□□ 2.32
PDS5AQ29RF7 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC29.56■■■□□ 2.32
PDS5AQ29RF7 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC29.56■■■□□ 2.32
PDS5AQ29RF7 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
PDS5AQ29RF7 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC29.55■■■□□ 2.32
PDS5AQ29RF7 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
PDS5AQ29RF7 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
PDS5AQ29RF7 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC29.55■■■□□ 2.32
PDS5AQ29RF7 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC29.55■■■□□ 2.32
PDS5AQ29RF7 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
PDS5AQ29RF7 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC29.54■■■□□ 2.32
PDS5AQ29RF7 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC29.54■■■□□ 2.32
PDS5AQ29RF7 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC29.53■■■□□ 2.32
PDS5AQ29RF7 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC29.53■■■□□ 2.32
PDS5AQ29RF7 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC29.53■■■□□ 2.32
PDS5AQ29RF7 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC29.53■■■□□ 2.32
PDS5AQ29RF7 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC29.53■■■□□ 2.32
PDS5AQ29RF7 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC29.52■■■□□ 2.32
PDS5AQ29RF7 RARRES2P1-201ENST00000474487 481 ntBASIC29.52■■■□□ 2.32
PDS5AQ29RF7 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC29.51■■■□□ 2.31
PDS5AQ29RF7 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC29.51■■■□□ 2.31
PDS5AQ29RF7 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC29.51■■■□□ 2.31
PDS5AQ29RF7 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC29.5■■■□□ 2.31
PDS5AQ29RF7 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC29.5■■■□□ 2.31
PDS5AQ29RF7 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
PDS5AQ29RF7 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
PDS5AQ29RF7 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC29.49■■■□□ 2.31
PDS5AQ29RF7 HYI-210ENST00000486909 905 ntTSL 5 BASIC29.49■■■□□ 2.31
PDS5AQ29RF7 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC29.49■■■□□ 2.31
PDS5AQ29RF7 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC29.49■■■□□ 2.31
PDS5AQ29RF7 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC29.48■■■□□ 2.31
PDS5AQ29RF7 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC29.48■■■□□ 2.31
PDS5AQ29RF7 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC29.48■■■□□ 2.31
PDS5AQ29RF7 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC29.48■■■□□ 2.31
PDS5AQ29RF7 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC29.47■■■□□ 2.31
PDS5AQ29RF7 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC29.47■■■□□ 2.31
PDS5AQ29RF7 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC29.47■■■□□ 2.31
PDS5AQ29RF7 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC29.47■■■□□ 2.31
PDS5AQ29RF7 SHF-206ENST00000560471 2499 ntTSL 5 BASIC29.47■■■□□ 2.31
PDS5AQ29RF7 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC29.46■■■□□ 2.31
PDS5AQ29RF7 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC29.46■■■□□ 2.31
PDS5AQ29RF7 AC139795.1-202ENST00000500444 432 ntBASIC29.45■■■□□ 2.31
PDS5AQ29RF7 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC29.45■■■□□ 2.31
PDS5AQ29RF7 AP004609.3-201ENST00000610705 1884 ntBASIC29.45■■■□□ 2.31
PDS5AQ29RF7 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.3
PDS5AQ29RF7 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.3
PDS5AQ29RF7 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC29.45■■■□□ 2.3
PDS5AQ29RF7 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC29.45■■■□□ 2.3
PDS5AQ29RF7 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC29.45■■■□□ 2.3
PDS5AQ29RF7 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC29.45■■■□□ 2.3
PDS5AQ29RF7 AC087393.1-201ENST00000582896 145 ntBASIC29.44■■■□□ 2.3
PDS5AQ29RF7 AC010980.1-201ENST00000587192 1142 ntBASIC29.44■■■□□ 2.3
PDS5AQ29RF7 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC29.44■■■□□ 2.3
PDS5AQ29RF7 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC29.44■■■□□ 2.3
PDS5AQ29RF7 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC29.43■■■□□ 2.3
PDS5AQ29RF7 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
PDS5AQ29RF7 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC29.43■■■□□ 2.3
PDS5AQ29RF7 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
PDS5AQ29RF7 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC29.43■■■□□ 2.3
PDS5AQ29RF7 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
PDS5AQ29RF7 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
PDS5AQ29RF7 BEX3-202ENST00000372634 753 ntTSL 2 BASIC29.42■■■□□ 2.3
PDS5AQ29RF7 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC29.42■■■□□ 2.3
PDS5AQ29RF7 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC29.42■■■□□ 2.3
PDS5AQ29RF7 AC019171.1-201ENST00000601251 1056 ntBASIC29.42■■■□□ 2.3
PDS5AQ29RF7 BHLHE23-202ENST00000612929 1109 ntBASIC29.42■■■□□ 2.3
PDS5AQ29RF7 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
PDS5AQ29RF7 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC29.42■■■□□ 2.3
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms