Protein–RNA interactions for Protein: P51800

CLCNKA, Chloride channel protein ClC-Ka, humanhuman

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKAP51800 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC23.95■■□□□ 1.42
CLCNKAP51800 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
CLCNKAP51800 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
CLCNKAP51800 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
CLCNKAP51800 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC23.94■■□□□ 1.42
CLCNKAP51800 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC23.94■■□□□ 1.42
CLCNKAP51800 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC23.94■■□□□ 1.42
CLCNKAP51800 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
CLCNKAP51800 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
CLCNKAP51800 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC23.93■■□□□ 1.42
CLCNKAP51800 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
CLCNKAP51800 AC129492.7-201ENST00000622992 756 ntBASIC23.93■■□□□ 1.42
CLCNKAP51800 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC23.93■■□□□ 1.42
CLCNKAP51800 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC23.93■■□□□ 1.42
CLCNKAP51800 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC23.92■■□□□ 1.42
CLCNKAP51800 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC23.92■■□□□ 1.42
CLCNKAP51800 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
CLCNKAP51800 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC23.91■■□□□ 1.42
CLCNKAP51800 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC23.91■■□□□ 1.42
CLCNKAP51800 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC23.9■■□□□ 1.42
CLCNKAP51800 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC23.9■■□□□ 1.42
CLCNKAP51800 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
CLCNKAP51800 TSPY13P-201ENST00000338964 914 ntBASIC23.9■■□□□ 1.42
CLCNKAP51800 AC004987.1-201ENST00000428627 508 ntBASIC23.9■■□□□ 1.42
CLCNKAP51800 ATP5G2P3-201ENST00000429083 425 ntBASIC23.9■■□□□ 1.42
CLCNKAP51800 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
CLCNKAP51800 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
CLCNKAP51800 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
CLCNKAP51800 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
CLCNKAP51800 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC23.89■■□□□ 1.41
CLCNKAP51800 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC23.89■■□□□ 1.41
CLCNKAP51800 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
CLCNKAP51800 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC23.89■■□□□ 1.41
CLCNKAP51800 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
CLCNKAP51800 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC23.88■■□□□ 1.41
CLCNKAP51800 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC23.88■■□□□ 1.41
CLCNKAP51800 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC23.88■■□□□ 1.41
CLCNKAP51800 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC23.88■■□□□ 1.41
CLCNKAP51800 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
CLCNKAP51800 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC23.88■■□□□ 1.41
CLCNKAP51800 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC23.88■■□□□ 1.41
CLCNKAP51800 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC23.88■■□□□ 1.41
CLCNKAP51800 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC23.88■■□□□ 1.41
CLCNKAP51800 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
CLCNKAP51800 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC23.87■■□□□ 1.41
CLCNKAP51800 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC23.87■■□□□ 1.41
CLCNKAP51800 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC23.87■■□□□ 1.41
CLCNKAP51800 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
CLCNKAP51800 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC23.87■■□□□ 1.41
CLCNKAP51800 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
CLCNKAP51800 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
CLCNKAP51800 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC23.86■■□□□ 1.41
CLCNKAP51800 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
CLCNKAP51800 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC23.85■■□□□ 1.41
CLCNKAP51800 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC23.85■■□□□ 1.41
CLCNKAP51800 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
CLCNKAP51800 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC23.85■■□□□ 1.41
CLCNKAP51800 AL033527.3-201ENST00000566366 1196 ntBASIC23.85■■□□□ 1.41
CLCNKAP51800 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC23.85■■□□□ 1.41
CLCNKAP51800 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC23.85■■□□□ 1.41
CLCNKAP51800 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC23.84■■□□□ 1.41
CLCNKAP51800 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC23.84■■□□□ 1.41
CLCNKAP51800 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC23.84■■□□□ 1.41
CLCNKAP51800 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC23.84■■□□□ 1.41
CLCNKAP51800 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
CLCNKAP51800 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC23.83■■□□□ 1.41
CLCNKAP51800 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC23.83■■□□□ 1.41
CLCNKAP51800 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
CLCNKAP51800 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
CLCNKAP51800 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC23.83■■□□□ 1.41
CLCNKAP51800 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
CLCNKAP51800 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC23.83■■□□□ 1.41
CLCNKAP51800 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
CLCNKAP51800 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC23.83■■□□□ 1.41
CLCNKAP51800 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC23.82■■□□□ 1.4
CLCNKAP51800 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
CLCNKAP51800 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC23.82■■□□□ 1.4
CLCNKAP51800 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC23.82■■□□□ 1.4
CLCNKAP51800 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC23.82■■□□□ 1.4
CLCNKAP51800 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
CLCNKAP51800 DUX4L9-201ENST00000449051 1259 ntBASIC23.82■■□□□ 1.4
CLCNKAP51800 SPCS2P3-201ENST00000500401 656 ntBASIC23.82■■□□□ 1.4
CLCNKAP51800 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
CLCNKAP51800 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC23.82■■□□□ 1.4
CLCNKAP51800 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
CLCNKAP51800 AL121749.1-202ENST00000609313 2153 ntBASIC23.81■■□□□ 1.4
CLCNKAP51800 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CLCNKAP51800 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
CLCNKAP51800 PKM-203ENST00000389093 2279 ntTSL 5 BASIC23.81■■□□□ 1.4
CLCNKAP51800 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
CLCNKAP51800 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
CLCNKAP51800 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
CLCNKAP51800 GUK1-208ENST00000366728 842 ntTSL 2 BASIC23.8■■□□□ 1.4
CLCNKAP51800 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC23.8■■□□□ 1.4
CLCNKAP51800 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC23.8■■□□□ 1.4
CLCNKAP51800 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
CLCNKAP51800 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
CLCNKAP51800 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC23.8■■□□□ 1.4
CLCNKAP51800 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
CLCNKAP51800 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC23.79■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms