Protein–RNA interactions for Protein: P22894

MMP8, Neutrophil collagenase, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP8P22894 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
MMP8P22894 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
MMP8P22894 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC25.76■■□□□ 1.71
MMP8P22894 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC25.75■■□□□ 1.71
MMP8P22894 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
MMP8P22894 MOB2-207ENST00000614710 705 ntTSL 5 BASIC25.75■■□□□ 1.71
MMP8P22894 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC25.75■■□□□ 1.71
MMP8P22894 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC25.74■■□□□ 1.71
MMP8P22894 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
MMP8P22894 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC25.74■■□□□ 1.71
MMP8P22894 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC25.74■■□□□ 1.71
MMP8P22894 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
MMP8P22894 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
MMP8P22894 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC25.74■■□□□ 1.71
MMP8P22894 AC092296.2-201ENST00000589470 999 ntBASIC25.74■■□□□ 1.71
MMP8P22894 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
MMP8P22894 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC25.73■■□□□ 1.71
MMP8P22894 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
MMP8P22894 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC25.73■■□□□ 1.71
MMP8P22894 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
MMP8P22894 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
MMP8P22894 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
MMP8P22894 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
MMP8P22894 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
MMP8P22894 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
MMP8P22894 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
MMP8P22894 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
MMP8P22894 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
MMP8P22894 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC25.71■■□□□ 1.71
MMP8P22894 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC25.71■■□□□ 1.71
MMP8P22894 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
MMP8P22894 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
MMP8P22894 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC25.7■■□□□ 1.7
MMP8P22894 AC025884.2-201ENST00000553429 711 ntBASIC25.7■■□□□ 1.7
MMP8P22894 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC25.7■■□□□ 1.7
MMP8P22894 AC022413.1-201ENST00000624602 984 ntBASIC25.7■■□□□ 1.7
MMP8P22894 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC25.7■■□□□ 1.7
MMP8P22894 ERN1-208ENST00000606895 2068 ntBASIC25.69■■□□□ 1.7
MMP8P22894 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
MMP8P22894 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
MMP8P22894 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
MMP8P22894 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
MMP8P22894 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC25.68■■□□□ 1.7
MMP8P22894 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
MMP8P22894 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
MMP8P22894 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC25.68■■□□□ 1.7
MMP8P22894 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC25.68■■□□□ 1.7
MMP8P22894 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC25.67■■□□□ 1.7
MMP8P22894 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC25.67■■□□□ 1.7
MMP8P22894 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC25.67■■□□□ 1.7
MMP8P22894 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC25.67■■□□□ 1.7
MMP8P22894 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC25.66■■□□□ 1.7
MMP8P22894 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC25.66■■□□□ 1.7
MMP8P22894 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC25.66■■□□□ 1.7
MMP8P22894 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
MMP8P22894 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
MMP8P22894 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
MMP8P22894 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
MMP8P22894 AC010501.1-201ENST00000606270 1962 ntBASIC25.66■■□□□ 1.7
MMP8P22894 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
MMP8P22894 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC25.66■■□□□ 1.7
MMP8P22894 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
MMP8P22894 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC25.66■■□□□ 1.7
MMP8P22894 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC25.65■■□□□ 1.7
MMP8P22894 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
MMP8P22894 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
MMP8P22894 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC25.65■■□□□ 1.7
MMP8P22894 PFN2-211ENST00000489155 636 ntTSL 4 BASIC25.65■■□□□ 1.7
MMP8P22894 CEP120-209ENST00000515110 606 ntTSL 3 BASIC25.65■■□□□ 1.7
MMP8P22894 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC25.65■■□□□ 1.7
MMP8P22894 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC25.65■■□□□ 1.7
MMP8P22894 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC25.64■■□□□ 1.7
MMP8P22894 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC25.64■■□□□ 1.7
MMP8P22894 ECEL1P2-201ENST00000461596 1295 ntBASIC25.64■■□□□ 1.7
MMP8P22894 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC25.64■■□□□ 1.69
MMP8P22894 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
MMP8P22894 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
MMP8P22894 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
MMP8P22894 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
MMP8P22894 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
MMP8P22894 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
MMP8P22894 SMPD5-203ENST00000639008 1464 ntBASIC25.62■■□□□ 1.69
MMP8P22894 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC25.62■■□□□ 1.69
MMP8P22894 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
MMP8P22894 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
MMP8P22894 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC25.62■■□□□ 1.69
MMP8P22894 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
MMP8P22894 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC25.61■■□□□ 1.69
MMP8P22894 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC25.61■■□□□ 1.69
MMP8P22894 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC25.6■■□□□ 1.69
MMP8P22894 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
MMP8P22894 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
MMP8P22894 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
MMP8P22894 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC25.6■■□□□ 1.69
MMP8P22894 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
MMP8P22894 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
MMP8P22894 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC25.6■■□□□ 1.69
MMP8P22894 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC25.59■■□□□ 1.69
MMP8P22894 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
MMP8P22894 GPX1-201ENST00000419349 1106 ntBASIC25.59■■□□□ 1.69
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms