Protein–RNA interactions for Protein: P03979

TRGV3, T cell receptor gamma variable 3 (Fragment), humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV3P03979 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
TRGV3P03979 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC19.08■□□□□ 0.64
TRGV3P03979 AC025884.2-201ENST00000553429 711 ntBASIC19.08■□□□□ 0.64
TRGV3P03979 MIR3960-201ENST00000583311 91 ntBASIC19.08■□□□□ 0.64
TRGV3P03979 BRD4-212ENST00000630599 726 ntTSL 2 BASIC19.08■□□□□ 0.64
TRGV3P03979 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC19.08■□□□□ 0.64
TRGV3P03979 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC19.08■□□□□ 0.64
TRGV3P03979 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC19.08■□□□□ 0.64
TRGV3P03979 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC19.08■□□□□ 0.64
TRGV3P03979 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
TRGV3P03979 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC19.07■□□□□ 0.64
TRGV3P03979 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC19.07■□□□□ 0.64
TRGV3P03979 RARRES2P2-201ENST00000394842 485 ntBASIC19.07■□□□□ 0.64
TRGV3P03979 PFN2-211ENST00000489155 636 ntTSL 4 BASIC19.07■□□□□ 0.64
TRGV3P03979 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
TRGV3P03979 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
TRGV3P03979 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
TRGV3P03979 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC19.07■□□□□ 0.64
TRGV3P03979 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TRGV3P03979 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TRGV3P03979 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TRGV3P03979 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC19.06■□□□□ 0.64
TRGV3P03979 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC19.06■□□□□ 0.64
TRGV3P03979 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
TRGV3P03979 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
TRGV3P03979 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
TRGV3P03979 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC19.05■□□□□ 0.64
TRGV3P03979 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TRGV3P03979 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TRGV3P03979 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TRGV3P03979 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC19.05■□□□□ 0.64
TRGV3P03979 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
TRGV3P03979 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
TRGV3P03979 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC19.04■□□□□ 0.64
TRGV3P03979 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRGV3P03979 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
TRGV3P03979 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
TRGV3P03979 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
TRGV3P03979 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRGV3P03979 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
TRGV3P03979 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
TRGV3P03979 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRGV3P03979 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC19.04■□□□□ 0.64
TRGV3P03979 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC19.04■□□□□ 0.64
TRGV3P03979 AC007029.1-201ENST00000604183 313 ntBASIC19.04■□□□□ 0.64
TRGV3P03979 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRGV3P03979 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
TRGV3P03979 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC19.04■□□□□ 0.64
TRGV3P03979 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC19.03■□□□□ 0.64
TRGV3P03979 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
TRGV3P03979 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
TRGV3P03979 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
TRGV3P03979 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TRGV3P03979 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC19.03■□□□□ 0.64
TRGV3P03979 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
TRGV3P03979 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
TRGV3P03979 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
TRGV3P03979 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
TRGV3P03979 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
TRGV3P03979 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
TRGV3P03979 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TRGV3P03979 RP9P-202ENST00000450133 1212 ntBASIC19.02■□□□□ 0.64
TRGV3P03979 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
TRGV3P03979 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC19.02■□□□□ 0.64
TRGV3P03979 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
TRGV3P03979 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
TRGV3P03979 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC19.02■□□□□ 0.63
TRGV3P03979 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TRGV3P03979 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC19.01■□□□□ 0.63
TRGV3P03979 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC19.01■□□□□ 0.63
TRGV3P03979 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
TRGV3P03979 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
TRGV3P03979 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
TRGV3P03979 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC19.01■□□□□ 0.63
TRGV3P03979 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC19.01■□□□□ 0.63
TRGV3P03979 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC19.01■□□□□ 0.63
TRGV3P03979 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC19■□□□□ 0.63
TRGV3P03979 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
TRGV3P03979 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC19■□□□□ 0.63
TRGV3P03979 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC19■□□□□ 0.63
TRGV3P03979 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
TRGV3P03979 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TRGV3P03979 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TRGV3P03979 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TRGV3P03979 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TRGV3P03979 AC093536.1-201ENST00000569153 554 ntBASIC18.99■□□□□ 0.63
TRGV3P03979 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC18.98■□□□□ 0.63
TRGV3P03979 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
TRGV3P03979 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRGV3P03979 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC18.98■□□□□ 0.63
TRGV3P03979 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRGV3P03979 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
TRGV3P03979 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
TRGV3P03979 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TRGV3P03979 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TRGV3P03979 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
TRGV3P03979 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
TRGV3P03979 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TRGV3P03979 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
TRGV3P03979 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC18.97■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 72.7 ms