Protein–RNA interactions for Protein: P01138

NGF, Beta-nerve growth factor, humanhuman

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NGFP01138 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
NGFP01138 HES4-202ENST00000428771 1040 ntTSL 2 BASIC21.13■□□□□ 0.97
NGFP01138 HSD17B1P1-201ENST00000590052 955 ntBASIC21.13■□□□□ 0.97
NGFP01138 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC21.13■□□□□ 0.97
NGFP01138 SMPD5-203ENST00000639008 1464 ntBASIC21.13■□□□□ 0.97
NGFP01138 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC21.12■□□□□ 0.97
NGFP01138 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
NGFP01138 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
NGFP01138 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC21.12■□□□□ 0.97
NGFP01138 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC21.12■□□□□ 0.97
NGFP01138 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
NGFP01138 AC025884.2-201ENST00000553429 711 ntBASIC21.12■□□□□ 0.97
NGFP01138 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
NGFP01138 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
NGFP01138 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
NGFP01138 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC21.11■□□□□ 0.97
NGFP01138 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC21.11■□□□□ 0.97
NGFP01138 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
NGFP01138 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
NGFP01138 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC21.1■□□□□ 0.97
NGFP01138 RNF126P1-201ENST00000567452 1320 ntBASIC21.1■□□□□ 0.97
NGFP01138 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
NGFP01138 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
NGFP01138 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
NGFP01138 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
NGFP01138 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC21.1■□□□□ 0.97
NGFP01138 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC21.1■□□□□ 0.97
NGFP01138 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
NGFP01138 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC21.09■□□□□ 0.97
NGFP01138 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC21.09■□□□□ 0.97
NGFP01138 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC21.09■□□□□ 0.97
NGFP01138 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC21.09■□□□□ 0.97
NGFP01138 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC21.09■□□□□ 0.97
NGFP01138 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
NGFP01138 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
NGFP01138 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
NGFP01138 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
NGFP01138 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC21.08■□□□□ 0.97
NGFP01138 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
NGFP01138 REST-210ENST00000638187 1334 ntTSL 5 BASIC21.07■□□□□ 0.96
NGFP01138 PFN2-211ENST00000489155 636 ntTSL 4 BASIC21.07■□□□□ 0.96
NGFP01138 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
NGFP01138 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC21.06■□□□□ 0.96
NGFP01138 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
NGFP01138 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
NGFP01138 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC21.06■□□□□ 0.96
NGFP01138 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
NGFP01138 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
NGFP01138 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
NGFP01138 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC21.06■□□□□ 0.96
NGFP01138 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
NGFP01138 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
NGFP01138 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
NGFP01138 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
NGFP01138 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
NGFP01138 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC21.05■□□□□ 0.96
NGFP01138 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC21.05■□□□□ 0.96
NGFP01138 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
NGFP01138 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC21.05■□□□□ 0.96
NGFP01138 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
NGFP01138 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
NGFP01138 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC21.04■□□□□ 0.96
NGFP01138 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC21.03■□□□□ 0.96
NGFP01138 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
NGFP01138 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
NGFP01138 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
NGFP01138 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC21.02■□□□□ 0.96
NGFP01138 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
NGFP01138 RARRES2P2-201ENST00000394842 485 ntBASIC21.02■□□□□ 0.96
NGFP01138 MIR3960-201ENST00000583311 91 ntBASIC21.02■□□□□ 0.96
NGFP01138 AC007029.1-201ENST00000604183 313 ntBASIC21.02■□□□□ 0.96
NGFP01138 BRD4-212ENST00000630599 726 ntTSL 2 BASIC21.02■□□□□ 0.96
NGFP01138 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
NGFP01138 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
NGFP01138 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
NGFP01138 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
NGFP01138 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
NGFP01138 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC21.01■□□□□ 0.95
NGFP01138 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
NGFP01138 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
NGFP01138 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
NGFP01138 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
NGFP01138 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
NGFP01138 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
NGFP01138 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
NGFP01138 AC091060.1-201ENST00000623524 1766 ntBASIC21■□□□□ 0.95
NGFP01138 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC21■□□□□ 0.95
NGFP01138 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC21■□□□□ 0.95
NGFP01138 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
NGFP01138 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
NGFP01138 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC20.99■□□□□ 0.95
NGFP01138 RP9P-202ENST00000450133 1212 ntBASIC20.99■□□□□ 0.95
NGFP01138 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
NGFP01138 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
NGFP01138 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC20.99■□□□□ 0.95
NGFP01138 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC20.99■□□□□ 0.95
NGFP01138 AC092803.2-201ENST00000564287 1899 ntBASIC20.98■□□□□ 0.95
NGFP01138 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
NGFP01138 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC20.98■□□□□ 0.95
NGFP01138 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC20.98■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 13.7 ms