Protein–RNA interactions for Protein: O60330

PCDHGA12, Protocadherin gamma-A12, humanhuman

Predictions only

Length 932 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA12O60330 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
PCDHGA12O60330 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
PCDHGA12O60330 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC24.19■■□□□ 1.46
PCDHGA12O60330 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
PCDHGA12O60330 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
PCDHGA12O60330 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC24.18■■□□□ 1.46
PCDHGA12O60330 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC24.18■■□□□ 1.46
PCDHGA12O60330 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC24.18■■□□□ 1.46
PCDHGA12O60330 IDNK-203ENST00000405990 629 ntTSL 2 BASIC24.18■■□□□ 1.46
PCDHGA12O60330 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC24.18■■□□□ 1.46
PCDHGA12O60330 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC24.17■■□□□ 1.46
PCDHGA12O60330 HES6-204ENST00000409182 863 ntTSL 2 BASIC24.17■■□□□ 1.46
PCDHGA12O60330 MIR4508-201ENST00000584178 70 ntBASIC24.17■■□□□ 1.46
PCDHGA12O60330 PVT1_1.1-201ENST00000615125 194 ntBASIC24.17■■□□□ 1.46
PCDHGA12O60330 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC24.16■■□□□ 1.46
PCDHGA12O60330 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC24.16■■□□□ 1.46
PCDHGA12O60330 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
PCDHGA12O60330 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
PCDHGA12O60330 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
PCDHGA12O60330 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC24.16■■□□□ 1.46
PCDHGA12O60330 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
PCDHGA12O60330 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
PCDHGA12O60330 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
PCDHGA12O60330 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC24.15■■□□□ 1.46
PCDHGA12O60330 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
PCDHGA12O60330 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
PCDHGA12O60330 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
PCDHGA12O60330 AL592295.1-201ENST00000400984 884 ntBASIC24.14■■□□□ 1.45
PCDHGA12O60330 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
PCDHGA12O60330 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
PCDHGA12O60330 IDNK-201ENST00000376417 511 ntTSL 5 BASIC24.13■■□□□ 1.45
PCDHGA12O60330 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
PCDHGA12O60330 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC24.13■■□□□ 1.45
PCDHGA12O60330 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC24.13■■□□□ 1.45
PCDHGA12O60330 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC24.13■■□□□ 1.45
PCDHGA12O60330 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC24.13■■□□□ 1.45
PCDHGA12O60330 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC24.13■■□□□ 1.45
PCDHGA12O60330 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC24.13■■□□□ 1.45
PCDHGA12O60330 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
PCDHGA12O60330 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
PCDHGA12O60330 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC24.11■■□□□ 1.45
PCDHGA12O60330 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC24.11■■□□□ 1.45
PCDHGA12O60330 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
PCDHGA12O60330 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC24.11■■□□□ 1.45
PCDHGA12O60330 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC24.11■■□□□ 1.45
PCDHGA12O60330 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC24.11■■□□□ 1.45
PCDHGA12O60330 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
PCDHGA12O60330 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC24.1■■□□□ 1.45
PCDHGA12O60330 GUSBP5-201ENST00000418136 578 ntBASIC24.1■■□□□ 1.45
PCDHGA12O60330 MTX2-204ENST00000443241 799 ntTSL 3 BASIC24.1■■□□□ 1.45
PCDHGA12O60330 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC24.1■■□□□ 1.45
PCDHGA12O60330 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
PCDHGA12O60330 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC24.1■■□□□ 1.45
PCDHGA12O60330 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC24.1■■□□□ 1.45
PCDHGA12O60330 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC24.1■■□□□ 1.45
PCDHGA12O60330 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC24.09■■□□□ 1.45
PCDHGA12O60330 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC24.09■■□□□ 1.45
PCDHGA12O60330 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC24.09■■□□□ 1.45
PCDHGA12O60330 AL359504.2-201ENST00000605506 1601 ntBASIC24.09■■□□□ 1.45
PCDHGA12O60330 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
PCDHGA12O60330 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC24.09■■□□□ 1.45
PCDHGA12O60330 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
PCDHGA12O60330 OR2A1-AS1-204ENST00000470435 602 ntBASIC24.08■■□□□ 1.45
PCDHGA12O60330 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.44
PCDHGA12O60330 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC24.07■■□□□ 1.44
PCDHGA12O60330 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC24.07■■□□□ 1.44
PCDHGA12O60330 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC24.07■■□□□ 1.44
PCDHGA12O60330 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
PCDHGA12O60330 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC24.07■■□□□ 1.44
PCDHGA12O60330 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC24.07■■□□□ 1.44
PCDHGA12O60330 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
PCDHGA12O60330 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
PCDHGA12O60330 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC24.06■■□□□ 1.44
PCDHGA12O60330 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC24.05■■□□□ 1.44
PCDHGA12O60330 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
PCDHGA12O60330 AC019171.1-201ENST00000601251 1056 ntBASIC24.05■■□□□ 1.44
PCDHGA12O60330 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC24.05■■□□□ 1.44
PCDHGA12O60330 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC24.05■■□□□ 1.44
PCDHGA12O60330 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC24.05■■□□□ 1.44
PCDHGA12O60330 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC24.04■■□□□ 1.44
PCDHGA12O60330 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC24.04■■□□□ 1.44
PCDHGA12O60330 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
PCDHGA12O60330 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC24.04■■□□□ 1.44
PCDHGA12O60330 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC24.04■■□□□ 1.44
PCDHGA12O60330 AC131212.1-201ENST00000613771 668 ntBASIC24.04■■□□□ 1.44
PCDHGA12O60330 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
PCDHGA12O60330 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
PCDHGA12O60330 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
PCDHGA12O60330 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
PCDHGA12O60330 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC24.03■■□□□ 1.44
PCDHGA12O60330 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC24.03■■□□□ 1.44
PCDHGA12O60330 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC24.03■■□□□ 1.44
PCDHGA12O60330 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
PCDHGA12O60330 AC103724.3-201ENST00000564481 992 ntBASIC24.03■■□□□ 1.44
PCDHGA12O60330 AL031848.2-201ENST00000607670 837 ntBASIC24.03■■□□□ 1.44
PCDHGA12O60330 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC24.03■■□□□ 1.44
PCDHGA12O60330 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
PCDHGA12O60330 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
PCDHGA12O60330 DRD5P2-201ENST00000421395 2012 ntBASIC24.02■■□□□ 1.44
PCDHGA12O60330 PRTG-204ENST00000561292 833 ntTSL 3 BASIC24.02■■□□□ 1.44
Retrieved 100 of 98,524 protein–RNA pairs in 14.3 ms