Protein–RNA interactions for Protein: A0A0K0K1C0

TRBV11-1, T-cell receptor beta variable 11-1 (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV11-1A0A0K0K1C0 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC22.63■■□□□ 1.21
TRBV11-1A0A0K0K1C0 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC22.63■■□□□ 1.21
TRBV11-1A0A0K0K1C0 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
TRBV11-1A0A0K0K1C0 AC129492.7-201ENST00000622992 756 ntBASIC22.63■■□□□ 1.21
TRBV11-1A0A0K0K1C0 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
TRBV11-1A0A0K0K1C0 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
TRBV11-1A0A0K0K1C0 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
TRBV11-1A0A0K0K1C0 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
TRBV11-1A0A0K0K1C0 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC22.62■■□□□ 1.21
TRBV11-1A0A0K0K1C0 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
TRBV11-1A0A0K0K1C0 AC004987.1-201ENST00000428627 508 ntBASIC22.62■■□□□ 1.21
TRBV11-1A0A0K0K1C0 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC22.62■■□□□ 1.21
TRBV11-1A0A0K0K1C0 AL033527.3-201ENST00000566366 1196 ntBASIC22.62■■□□□ 1.21
TRBV11-1A0A0K0K1C0 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC22.62■■□□□ 1.21
TRBV11-1A0A0K0K1C0 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
TRBV11-1A0A0K0K1C0 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
TRBV11-1A0A0K0K1C0 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
TRBV11-1A0A0K0K1C0 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
TRBV11-1A0A0K0K1C0 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC22.61■■□□□ 1.21
TRBV11-1A0A0K0K1C0 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC22.61■■□□□ 1.21
TRBV11-1A0A0K0K1C0 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC22.6■■□□□ 1.21
TRBV11-1A0A0K0K1C0 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
TRBV11-1A0A0K0K1C0 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC22.6■■□□□ 1.21
TRBV11-1A0A0K0K1C0 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
TRBV11-1A0A0K0K1C0 TSPY13P-201ENST00000338964 914 ntBASIC22.6■■□□□ 1.21
TRBV11-1A0A0K0K1C0 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
TRBV11-1A0A0K0K1C0 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC22.6■■□□□ 1.21
TRBV11-1A0A0K0K1C0 ATP5G2P3-201ENST00000429083 425 ntBASIC22.6■■□□□ 1.21
TRBV11-1A0A0K0K1C0 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC22.6■■□□□ 1.21
TRBV11-1A0A0K0K1C0 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC22.6■■□□□ 1.21
TRBV11-1A0A0K0K1C0 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
TRBV11-1A0A0K0K1C0 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
TRBV11-1A0A0K0K1C0 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC22.59■■□□□ 1.21
TRBV11-1A0A0K0K1C0 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC22.59■■□□□ 1.21
TRBV11-1A0A0K0K1C0 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC22.59■■□□□ 1.21
TRBV11-1A0A0K0K1C0 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC22.58■■□□□ 1.21
TRBV11-1A0A0K0K1C0 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
TRBV11-1A0A0K0K1C0 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC22.58■■□□□ 1.21
TRBV11-1A0A0K0K1C0 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC22.58■■□□□ 1.21
TRBV11-1A0A0K0K1C0 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC22.58■■□□□ 1.21
TRBV11-1A0A0K0K1C0 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC22.58■■□□□ 1.2
TRBV11-1A0A0K0K1C0 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC22.57■■□□□ 1.2
TRBV11-1A0A0K0K1C0 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
TRBV11-1A0A0K0K1C0 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC22.57■■□□□ 1.2
TRBV11-1A0A0K0K1C0 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC22.57■■□□□ 1.2
TRBV11-1A0A0K0K1C0 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
TRBV11-1A0A0K0K1C0 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC22.57■■□□□ 1.2
TRBV11-1A0A0K0K1C0 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC22.57■■□□□ 1.2
TRBV11-1A0A0K0K1C0 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC22.57■■□□□ 1.2
TRBV11-1A0A0K0K1C0 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC22.56■■□□□ 1.2
TRBV11-1A0A0K0K1C0 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
TRBV11-1A0A0K0K1C0 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
TRBV11-1A0A0K0K1C0 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
TRBV11-1A0A0K0K1C0 DUX4L9-201ENST00000449051 1259 ntBASIC22.56■■□□□ 1.2
TRBV11-1A0A0K0K1C0 DUX4L18-201ENST00000553347 1267 ntBASIC22.56■■□□□ 1.2
TRBV11-1A0A0K0K1C0 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC22.55■■□□□ 1.2
TRBV11-1A0A0K0K1C0 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
TRBV11-1A0A0K0K1C0 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
TRBV11-1A0A0K0K1C0 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
TRBV11-1A0A0K0K1C0 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC22.55■■□□□ 1.2
TRBV11-1A0A0K0K1C0 SPCS2P3-201ENST00000500401 656 ntBASIC22.55■■□□□ 1.2
TRBV11-1A0A0K0K1C0 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
TRBV11-1A0A0K0K1C0 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
TRBV11-1A0A0K0K1C0 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC22.54■■□□□ 1.2
TRBV11-1A0A0K0K1C0 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
TRBV11-1A0A0K0K1C0 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
TRBV11-1A0A0K0K1C0 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC22.54■■□□□ 1.2
TRBV11-1A0A0K0K1C0 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
TRBV11-1A0A0K0K1C0 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC22.54■■□□□ 1.2
TRBV11-1A0A0K0K1C0 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
TRBV11-1A0A0K0K1C0 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
TRBV11-1A0A0K0K1C0 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
TRBV11-1A0A0K0K1C0 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
TRBV11-1A0A0K0K1C0 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC22.53■■□□□ 1.2
TRBV11-1A0A0K0K1C0 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC22.53■■□□□ 1.2
TRBV11-1A0A0K0K1C0 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC22.53■■□□□ 1.2
TRBV11-1A0A0K0K1C0 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
TRBV11-1A0A0K0K1C0 GUK1-208ENST00000366728 842 ntTSL 2 BASIC22.52■■□□□ 1.2
TRBV11-1A0A0K0K1C0 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC22.52■■□□□ 1.2
TRBV11-1A0A0K0K1C0 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
TRBV11-1A0A0K0K1C0 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC22.52■■□□□ 1.2
TRBV11-1A0A0K0K1C0 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC22.52■■□□□ 1.2
TRBV11-1A0A0K0K1C0 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC22.52■■□□□ 1.2
TRBV11-1A0A0K0K1C0 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC22.52■■□□□ 1.19
TRBV11-1A0A0K0K1C0 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
TRBV11-1A0A0K0K1C0 AC018755.3-202ENST00000596210 929 ntBASIC22.51■■□□□ 1.19
TRBV11-1A0A0K0K1C0 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC22.51■■□□□ 1.19
TRBV11-1A0A0K0K1C0 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
TRBV11-1A0A0K0K1C0 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC22.5■■□□□ 1.19
TRBV11-1A0A0K0K1C0 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
TRBV11-1A0A0K0K1C0 MIR6765-201ENST00000614092 87 ntBASIC22.5■■□□□ 1.19
TRBV11-1A0A0K0K1C0 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC22.5■■□□□ 1.19
TRBV11-1A0A0K0K1C0 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
TRBV11-1A0A0K0K1C0 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
TRBV11-1A0A0K0K1C0 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
TRBV11-1A0A0K0K1C0 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC22.49■■□□□ 1.19
TRBV11-1A0A0K0K1C0 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC22.49■■□□□ 1.19
TRBV11-1A0A0K0K1C0 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.19
TRBV11-1A0A0K0K1C0 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
TRBV11-1A0A0K0K1C0 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms