Protein–RNA interactions for Protein: A0A075B6M9

TRBV23OR9-2, T-cell receptor beta variable 23/OR9-2 (pseudogene) (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV23OR9-2A0A075B6M9 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC23.85■■□□□ 1.41
TRBV23OR9-2A0A075B6M9 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
TRBV23OR9-2A0A075B6M9 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
TRBV23OR9-2A0A075B6M9 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
TRBV23OR9-2A0A075B6M9 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC23.84■■□□□ 1.41
TRBV23OR9-2A0A075B6M9 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
TRBV23OR9-2A0A075B6M9 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC23.83■■□□□ 1.41
TRBV23OR9-2A0A075B6M9 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
TRBV23OR9-2A0A075B6M9 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC23.83■■□□□ 1.41
TRBV23OR9-2A0A075B6M9 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
TRBV23OR9-2A0A075B6M9 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC23.83■■□□□ 1.41
TRBV23OR9-2A0A075B6M9 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
TRBV23OR9-2A0A075B6M9 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
TRBV23OR9-2A0A075B6M9 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC23.82■■□□□ 1.4
TRBV23OR9-2A0A075B6M9 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC23.82■■□□□ 1.4
TRBV23OR9-2A0A075B6M9 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC23.82■■□□□ 1.4
TRBV23OR9-2A0A075B6M9 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC23.82■■□□□ 1.4
TRBV23OR9-2A0A075B6M9 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC23.82■■□□□ 1.4
TRBV23OR9-2A0A075B6M9 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
TRBV23OR9-2A0A075B6M9 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
TRBV23OR9-2A0A075B6M9 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
TRBV23OR9-2A0A075B6M9 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC23.81■■□□□ 1.4
TRBV23OR9-2A0A075B6M9 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC23.81■■□□□ 1.4
TRBV23OR9-2A0A075B6M9 BHLHE23-202ENST00000612929 1109 ntBASIC23.81■■□□□ 1.4
TRBV23OR9-2A0A075B6M9 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC23.81■■□□□ 1.4
TRBV23OR9-2A0A075B6M9 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC23.81■■□□□ 1.4
TRBV23OR9-2A0A075B6M9 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
TRBV23OR9-2A0A075B6M9 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC23.81■■□□□ 1.4
TRBV23OR9-2A0A075B6M9 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC23.81■■□□□ 1.4
TRBV23OR9-2A0A075B6M9 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
TRBV23OR9-2A0A075B6M9 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
TRBV23OR9-2A0A075B6M9 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC23.8■■□□□ 1.4
TRBV23OR9-2A0A075B6M9 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
TRBV23OR9-2A0A075B6M9 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
TRBV23OR9-2A0A075B6M9 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC23.79■■□□□ 1.4
TRBV23OR9-2A0A075B6M9 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC23.79■■□□□ 1.4
TRBV23OR9-2A0A075B6M9 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC23.79■■□□□ 1.4
TRBV23OR9-2A0A075B6M9 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC23.79■■□□□ 1.4
TRBV23OR9-2A0A075B6M9 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
TRBV23OR9-2A0A075B6M9 AP004609.3-201ENST00000610705 1884 ntBASIC23.79■■□□□ 1.4
TRBV23OR9-2A0A075B6M9 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
TRBV23OR9-2A0A075B6M9 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
TRBV23OR9-2A0A075B6M9 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC23.78■■□□□ 1.4
TRBV23OR9-2A0A075B6M9 AC018755.3-202ENST00000596210 929 ntBASIC23.78■■□□□ 1.4
TRBV23OR9-2A0A075B6M9 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC23.78■■□□□ 1.4
TRBV23OR9-2A0A075B6M9 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC23.78■■□□□ 1.4
TRBV23OR9-2A0A075B6M9 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
TRBV23OR9-2A0A075B6M9 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
TRBV23OR9-2A0A075B6M9 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC23.77■■□□□ 1.4
TRBV23OR9-2A0A075B6M9 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
TRBV23OR9-2A0A075B6M9 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC23.77■■□□□ 1.4
TRBV23OR9-2A0A075B6M9 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC23.76■■□□□ 1.39
TRBV23OR9-2A0A075B6M9 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
TRBV23OR9-2A0A075B6M9 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
TRBV23OR9-2A0A075B6M9 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC23.76■■□□□ 1.39
TRBV23OR9-2A0A075B6M9 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC23.76■■□□□ 1.39
TRBV23OR9-2A0A075B6M9 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
TRBV23OR9-2A0A075B6M9 MIR6765-201ENST00000614092 87 ntBASIC23.76■■□□□ 1.39
TRBV23OR9-2A0A075B6M9 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC23.75■■□□□ 1.39
TRBV23OR9-2A0A075B6M9 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
TRBV23OR9-2A0A075B6M9 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
TRBV23OR9-2A0A075B6M9 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
TRBV23OR9-2A0A075B6M9 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC23.74■■□□□ 1.39
TRBV23OR9-2A0A075B6M9 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
TRBV23OR9-2A0A075B6M9 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
TRBV23OR9-2A0A075B6M9 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC23.74■■□□□ 1.39
TRBV23OR9-2A0A075B6M9 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC23.74■■□□□ 1.39
TRBV23OR9-2A0A075B6M9 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC23.73■■□□□ 1.39
TRBV23OR9-2A0A075B6M9 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
TRBV23OR9-2A0A075B6M9 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC23.73■■□□□ 1.39
TRBV23OR9-2A0A075B6M9 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC23.73■■□□□ 1.39
TRBV23OR9-2A0A075B6M9 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC23.73■■□□□ 1.39
TRBV23OR9-2A0A075B6M9 SHF-208ENST00000560734 1731 ntTSL 3 BASIC23.73■■□□□ 1.39
TRBV23OR9-2A0A075B6M9 AC142472.1-201ENST00000612013 1741 ntBASIC23.73■■□□□ 1.39
TRBV23OR9-2A0A075B6M9 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC23.73■■□□□ 1.39
TRBV23OR9-2A0A075B6M9 RARRES2P1-201ENST00000474487 481 ntBASIC23.72■■□□□ 1.39
TRBV23OR9-2A0A075B6M9 AC010980.1-201ENST00000587192 1142 ntBASIC23.72■■□□□ 1.39
TRBV23OR9-2A0A075B6M9 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC23.72■■□□□ 1.39
TRBV23OR9-2A0A075B6M9 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC23.72■■□□□ 1.39
TRBV23OR9-2A0A075B6M9 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC23.72■■□□□ 1.39
TRBV23OR9-2A0A075B6M9 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC23.71■■□□□ 1.39
TRBV23OR9-2A0A075B6M9 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC23.71■■□□□ 1.39
TRBV23OR9-2A0A075B6M9 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC23.71■■□□□ 1.39
TRBV23OR9-2A0A075B6M9 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC23.71■■□□□ 1.39
TRBV23OR9-2A0A075B6M9 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
TRBV23OR9-2A0A075B6M9 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC23.71■■□□□ 1.39
TRBV23OR9-2A0A075B6M9 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC23.71■■□□□ 1.39
TRBV23OR9-2A0A075B6M9 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
TRBV23OR9-2A0A075B6M9 AC139795.1-202ENST00000500444 432 ntBASIC23.71■■□□□ 1.39
TRBV23OR9-2A0A075B6M9 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
TRBV23OR9-2A0A075B6M9 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC23.7■■□□□ 1.39
TRBV23OR9-2A0A075B6M9 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.39
TRBV23OR9-2A0A075B6M9 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
TRBV23OR9-2A0A075B6M9 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC23.7■■□□□ 1.38
TRBV23OR9-2A0A075B6M9 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
TRBV23OR9-2A0A075B6M9 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
TRBV23OR9-2A0A075B6M9 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
TRBV23OR9-2A0A075B6M9 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
TRBV23OR9-2A0A075B6M9 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
TRBV23OR9-2A0A075B6M9 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 65.3 ms