Protein–RNA interactions for Protein: Q9UH73

EBF1, Transcription factor COE1, humanhuman

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF1Q9UH73 COX5A-206ENST00000568783 571 ntTSL 3 BASIC17.84■□□□□ 0.45
EBF1Q9UH73 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC17.84■□□□□ 0.45
EBF1Q9UH73 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC17.84■□□□□ 0.45
EBF1Q9UH73 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC17.84■□□□□ 0.45
EBF1Q9UH73 AL589182.2-201ENST00000619332 1049 ntBASIC17.84■□□□□ 0.45
EBF1Q9UH73 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC17.84■□□□□ 0.45
EBF1Q9UH73 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
EBF1Q9UH73 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
EBF1Q9UH73 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
EBF1Q9UH73 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
EBF1Q9UH73 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC17.84■□□□□ 0.45
EBF1Q9UH73 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
EBF1Q9UH73 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
EBF1Q9UH73 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
EBF1Q9UH73 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC17.84■□□□□ 0.45
EBF1Q9UH73 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
EBF1Q9UH73 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
EBF1Q9UH73 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
EBF1Q9UH73 CD276-203ENST00000537340 2439 ntTSL 2 BASIC17.83■□□□□ 0.45
EBF1Q9UH73 AC009053.2-201ENST00000563701 2365 ntBASIC17.83■□□□□ 0.45
EBF1Q9UH73 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
EBF1Q9UH73 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC17.83■□□□□ 0.45
EBF1Q9UH73 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC17.83■□□□□ 0.45
EBF1Q9UH73 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
EBF1Q9UH73 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC17.83■□□□□ 0.45
EBF1Q9UH73 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
EBF1Q9UH73 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC17.83■□□□□ 0.44
EBF1Q9UH73 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
EBF1Q9UH73 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
EBF1Q9UH73 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC17.83■□□□□ 0.44
EBF1Q9UH73 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC17.83■□□□□ 0.44
EBF1Q9UH73 SPDYE21P-201ENST00000413323 827 ntBASIC17.83■□□□□ 0.44
EBF1Q9UH73 AC103564.2-201ENST00000432853 1299 ntBASIC17.83■□□□□ 0.44
EBF1Q9UH73 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC17.83■□□□□ 0.44
EBF1Q9UH73 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.44
EBF1Q9UH73 RPS15-207ENST00000591032 550 ntTSL 3 BASIC17.83■□□□□ 0.44
EBF1Q9UH73 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
EBF1Q9UH73 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC17.83■□□□□ 0.44
EBF1Q9UH73 AL031598.1-201ENST00000561511 1773 ntBASIC17.83■□□□□ 0.44
EBF1Q9UH73 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
EBF1Q9UH73 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
EBF1Q9UH73 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC17.82■□□□□ 0.44
EBF1Q9UH73 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC17.82■□□□□ 0.44
EBF1Q9UH73 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
EBF1Q9UH73 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
EBF1Q9UH73 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
EBF1Q9UH73 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC17.82■□□□□ 0.44
EBF1Q9UH73 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
EBF1Q9UH73 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
EBF1Q9UH73 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
EBF1Q9UH73 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
EBF1Q9UH73 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
EBF1Q9UH73 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
EBF1Q9UH73 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC17.82■□□□□ 0.44
EBF1Q9UH73 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC17.82■□□□□ 0.44
EBF1Q9UH73 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC17.82■□□□□ 0.44
EBF1Q9UH73 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
EBF1Q9UH73 LBH-203ENST00000404397 543 ntTSL 4 BASIC17.82■□□□□ 0.44
EBF1Q9UH73 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC17.82■□□□□ 0.44
EBF1Q9UH73 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC17.82■□□□□ 0.44
EBF1Q9UH73 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC17.82■□□□□ 0.44
EBF1Q9UH73 YBX1P5-201ENST00000509441 847 ntBASIC17.82■□□□□ 0.44
EBF1Q9UH73 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
EBF1Q9UH73 AC005829.1-201ENST00000570002 483 ntBASIC17.82■□□□□ 0.44
EBF1Q9UH73 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC17.82■□□□□ 0.44
EBF1Q9UH73 TCAP-202ENST00000578283 583 ntTSL 5 BASIC17.82■□□□□ 0.44
EBF1Q9UH73 LINC02084-201ENST00000606069 1096 ntBASIC17.82■□□□□ 0.44
EBF1Q9UH73 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
EBF1Q9UH73 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC17.82■□□□□ 0.44
EBF1Q9UH73 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
EBF1Q9UH73 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC17.82■□□□□ 0.44
EBF1Q9UH73 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
EBF1Q9UH73 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
EBF1Q9UH73 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
EBF1Q9UH73 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
EBF1Q9UH73 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
EBF1Q9UH73 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
EBF1Q9UH73 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC17.82■□□□□ 0.44
EBF1Q9UH73 CD276-201ENST00000318424 2738 ntTSL 5 BASIC17.82■□□□□ 0.44
EBF1Q9UH73 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
EBF1Q9UH73 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
EBF1Q9UH73 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
EBF1Q9UH73 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
EBF1Q9UH73 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
EBF1Q9UH73 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC17.82■□□□□ 0.44
EBF1Q9UH73 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
EBF1Q9UH73 PHGDH-209ENST00000641074 1780 ntBASIC17.81■□□□□ 0.44
EBF1Q9UH73 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
EBF1Q9UH73 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
EBF1Q9UH73 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
EBF1Q9UH73 KRT8P47-201ENST00000604727 1398 ntBASIC17.81■□□□□ 0.44
EBF1Q9UH73 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC17.81■□□□□ 0.44
EBF1Q9UH73 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
EBF1Q9UH73 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
EBF1Q9UH73 AC022898.2-201ENST00000616822 1312 ntBASIC17.81■□□□□ 0.44
EBF1Q9UH73 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
EBF1Q9UH73 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
EBF1Q9UH73 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
EBF1Q9UH73 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC17.81■□□□□ 0.44
EBF1Q9UH73 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms