Protein–RNA interactions for Protein: Q9UBK2

PPARGC1A, Peroxisome proliferator-activated receptor gamma coactivator 1-alpha, humanhuman

Known RBP Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1AQ9UBK2 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PPARGC1AQ9UBK2 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
PPARGC1AQ9UBK2 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
PPARGC1AQ9UBK2 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC18.28■□□□□ 0.52
PPARGC1AQ9UBK2 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PPARGC1AQ9UBK2 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PPARGC1AQ9UBK2 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PPARGC1AQ9UBK2 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PPARGC1AQ9UBK2 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PPARGC1AQ9UBK2 FAM220CP-201ENST00000395253 831 ntBASIC18.28■□□□□ 0.52
PPARGC1AQ9UBK2 PON3-205ENST00000451904 1053 ntTSL 3 BASIC18.28■□□□□ 0.52
PPARGC1AQ9UBK2 KRT16P4-201ENST00000453883 522 ntBASIC18.28■□□□□ 0.52
PPARGC1AQ9UBK2 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC18.28■□□□□ 0.52
PPARGC1AQ9UBK2 AC096582.2-201ENST00000510860 516 ntBASIC18.28■□□□□ 0.52
PPARGC1AQ9UBK2 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC18.28■□□□□ 0.52
PPARGC1AQ9UBK2 PRELID1P1-202ENST00000567272 903 ntBASIC18.28■□□□□ 0.52
PPARGC1AQ9UBK2 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC18.28■□□□□ 0.52
PPARGC1AQ9UBK2 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PPARGC1AQ9UBK2 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PPARGC1AQ9UBK2 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PPARGC1AQ9UBK2 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PPARGC1AQ9UBK2 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
PPARGC1AQ9UBK2 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PPARGC1AQ9UBK2 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC18.28■□□□□ 0.52
PPARGC1AQ9UBK2 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC18.28■□□□□ 0.52
PPARGC1AQ9UBK2 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
PPARGC1AQ9UBK2 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PPARGC1AQ9UBK2 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
PPARGC1AQ9UBK2 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC18.27■□□□□ 0.52
PPARGC1AQ9UBK2 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PPARGC1AQ9UBK2 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
PPARGC1AQ9UBK2 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PPARGC1AQ9UBK2 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PPARGC1AQ9UBK2 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
PPARGC1AQ9UBK2 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC18.27■□□□□ 0.52
PPARGC1AQ9UBK2 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC18.27■□□□□ 0.52
PPARGC1AQ9UBK2 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC18.27■□□□□ 0.52
PPARGC1AQ9UBK2 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC18.27■□□□□ 0.52
PPARGC1AQ9UBK2 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
PPARGC1AQ9UBK2 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
PPARGC1AQ9UBK2 CD9-202ENST00000382515 1229 ntTSL 5 BASIC18.27■□□□□ 0.52
PPARGC1AQ9UBK2 CTNS-203ENST00000399306 803 ntTSL 3 BASIC18.27■□□□□ 0.52
PPARGC1AQ9UBK2 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
PPARGC1AQ9UBK2 FOSL1P1-201ENST00000511041 816 ntBASIC18.27■□□□□ 0.52
PPARGC1AQ9UBK2 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC18.27■□□□□ 0.52
PPARGC1AQ9UBK2 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC18.27■□□□□ 0.52
PPARGC1AQ9UBK2 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC18.27■□□□□ 0.52
PPARGC1AQ9UBK2 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC18.27■□□□□ 0.52
PPARGC1AQ9UBK2 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PPARGC1AQ9UBK2 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
PPARGC1AQ9UBK2 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC18.27■□□□□ 0.51
PPARGC1AQ9UBK2 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.51
PPARGC1AQ9UBK2 INTS4P1-201ENST00000438455 1935 ntBASIC18.27■□□□□ 0.51
PPARGC1AQ9UBK2 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.51
PPARGC1AQ9UBK2 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.51
PPARGC1AQ9UBK2 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
PPARGC1AQ9UBK2 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
PPARGC1AQ9UBK2 ADM-208ENST00000534464 1640 ntTSL 2 BASIC18.27■□□□□ 0.51
PPARGC1AQ9UBK2 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
PPARGC1AQ9UBK2 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC18.26■□□□□ 0.51
PPARGC1AQ9UBK2 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC18.26■□□□□ 0.51
PPARGC1AQ9UBK2 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PPARGC1AQ9UBK2 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PPARGC1AQ9UBK2 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
PPARGC1AQ9UBK2 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC18.26■□□□□ 0.51
PPARGC1AQ9UBK2 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
PPARGC1AQ9UBK2 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PPARGC1AQ9UBK2 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
PPARGC1AQ9UBK2 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC18.26■□□□□ 0.51
PPARGC1AQ9UBK2 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PPARGC1AQ9UBK2 GNE-204ENST00000539208 2190 ntTSL 2 BASIC18.26■□□□□ 0.51
PPARGC1AQ9UBK2 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PPARGC1AQ9UBK2 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PPARGC1AQ9UBK2 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
PPARGC1AQ9UBK2 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PPARGC1AQ9UBK2 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
PPARGC1AQ9UBK2 RCN1P2-201ENST00000398357 915 ntBASIC18.26■□□□□ 0.51
PPARGC1AQ9UBK2 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
PPARGC1AQ9UBK2 TSPY19P-201ENST00000418461 509 ntBASIC18.26■□□□□ 0.51
PPARGC1AQ9UBK2 TSPY18P-201ENST00000441642 509 ntBASIC18.26■□□□□ 0.51
PPARGC1AQ9UBK2 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC18.26■□□□□ 0.51
PPARGC1AQ9UBK2 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC18.26■□□□□ 0.51
PPARGC1AQ9UBK2 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC18.26■□□□□ 0.51
PPARGC1AQ9UBK2 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC18.26■□□□□ 0.51
PPARGC1AQ9UBK2 AL121772.3-201ENST00000610840 674 ntBASIC18.26■□□□□ 0.51
PPARGC1AQ9UBK2 SIRPAP1-201ENST00000448467 1770 ntBASIC18.26■□□□□ 0.51
PPARGC1AQ9UBK2 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC18.26■□□□□ 0.51
PPARGC1AQ9UBK2 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC18.26■□□□□ 0.51
PPARGC1AQ9UBK2 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
PPARGC1AQ9UBK2 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PPARGC1AQ9UBK2 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PPARGC1AQ9UBK2 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
PPARGC1AQ9UBK2 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PPARGC1AQ9UBK2 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC18.26■□□□□ 0.51
PPARGC1AQ9UBK2 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
PPARGC1AQ9UBK2 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC18.26■□□□□ 0.51
PPARGC1AQ9UBK2 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PPARGC1AQ9UBK2 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PPARGC1AQ9UBK2 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PPARGC1AQ9UBK2 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC18.25■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms